RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 M0QZQ0 153 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 SERPINF2P08697 491 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 SEC13P55735 322 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
RFPL3-201ENST00000249007 PPP2R5AQ15172 486 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 TAF12Q16514 161 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
RFPL3-201ENST00000249007 FRMD1Q8N878 549 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 WHAMMQ8TF30 809 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 SEPT5Q99719 369 aaPredicted RBP13.02□□□□□ -0.33
RFPL3-201ENST00000249007 CDT1Q9H211 546 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 CAPN10Q9HC96 672 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 CNTN3Q9P232 1028 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 MMP17Q9ULZ9 603 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 APOBEC2Q9Y235 224 aaKnown RBP13.02□□□□□ -0.33
RFPL3-201ENST00000249007 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.33
RFPL3-201ENST00000249007 PTPRBP23467 1997 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 PCDH15Q96QU1 1955 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 ATXN7O15265 892 aaPredicted RBP13.01□□□□□ -0.33
RFPL3-201ENST00000249007 DEXIO95424 95 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 LARGE1O95461 756 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 HSPA4P34932 840 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 SLC14A1Q13336 389 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 RABEPKQ7Z6M1 372 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 CCDC33Q8N5R6 958 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 ATP2A3Q93084 1043 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 AIFM3Q96NN9 605 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 GTPBP4Q9BZE4 634 aaKnown RBP13.01□□□□□ -0.33
RFPL3-201ENST00000249007 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
RFPL3-201ENST00000249007 DNAAF2Q9NVR5 837 aaKnown RBP13.01□□□□□ -0.33
RFPL3-201ENST00000249007 HSFX1Q9UBD0 423 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 KCNJ14Q9UNX9 436 aa13.01□□□□□ -0.33
RFPL3-201ENST00000249007 COL12A1Q99715 3063 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 KNL1Q8NG31 2342 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 ARHGAP33O14559 1287 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 ATF6P18850 670 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 NMT1P30419 496 aaKnown RBP13□□□□□ -0.33
RFPL3-201ENST00000249007 ABCG1P45844 678 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 MYBPC2Q14324 1141 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 MTF1Q14872 753 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 OVOS1Q6IE37 1185 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 NAXDQ8IW45 347 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 TTC16Q8NEE8 873 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
RFPL3-201ENST00000249007 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
RFPL3-201ENST00000249007 TUBGCP4Q9UGJ1 667 aa13□□□□□ -0.33
RFPL3-201ENST00000249007 J3QKU1 62 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 K7ERI5 159 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 SYPP08247 313 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.33
RFPL3-201ENST00000249007 PDIA3P30101 505 aaKnown RBP12.99□□□□□ -0.33
RFPL3-201ENST00000249007 TUFMP49411 452 aaKnown RBP12.99□□□□□ -0.33
RFPL3-201ENST00000249007 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 BYSLQ13895 437 aaKnown RBP12.99□□□□□ -0.33
RFPL3-201ENST00000249007 BECN1Q14457 450 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 MGAT5BQ3V5L5 792 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 ARMCX5Q6P1M9 558 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 PADI6Q6TGC4 694 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 ZNF843Q8N446 348 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 OSCP1Q8WVF1 389 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 IFT74Q96LB3 600 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 TTC12Q9H892 705 aaPredicted RBP12.99□□□□□ -0.33
RFPL3-201ENST00000249007 DENND4CQ5VZ89 1909 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 PLXND1Q9Y4D7 1925 aa12.99□□□□□ -0.33
RFPL3-201ENST00000249007 K7EQS6 105 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 CPLX1O14810 134 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 AP5Z1O43299 807 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 HNRNPLP14866 589 aaKnown RBP eCLIP12.98□□□□□ -0.33
RFPL3-201ENST00000249007 CYP11B2P19099 503 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 IFNAR2P48551 515 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 CDR1P51861 262 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 NLRP12P59046 1061 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 NR1H3Q13133 447 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 MAP7D1Q3KQU3 841 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 TXNDC8Q6A555 127 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 TMEM150AQ86TG1 271 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 SLCO6A1Q86UG4 719 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 PIP4K2CQ8TBX8 421 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 GIPC2Q8TF65 315 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 ANP32BQ92688 251 aaKnown RBP12.98□□□□□ -0.33
RFPL3-201ENST00000249007 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
RFPL3-201ENST00000249007 ACO2Q99798 780 aaKnown RBP12.98□□□□□ -0.33
RFPL3-201ENST00000249007 TCHPQ9BT92 498 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 AGXT2Q9BYV1 514 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
RFPL3-201ENST00000249007 ANTXRLA6NF34 631 aa12.97□□□□□ -0.33
RFPL3-201ENST00000249007 SPATA31C1P0DKV0 1188 aa12.97□□□□□ -0.33
RFPL3-201ENST00000249007 MCF2P10911 925 aa12.97□□□□□ -0.33
RFPL3-201ENST00000249007 PTMSP20962 102 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms