RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TTC39CQ8N584 583 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 JOSD2Q8TAC2 188 aa19.54■□□□□ 0.72
HOXC11-201ENST00000243082 C18orf25Q96B23 403 aaPredicted RBP19.54■□□□□ 0.72
HOXC11-201ENST00000243082 RNF25Q96BH1 459 aaPredicted RBP19.54■□□□□ 0.72
HOXC11-201ENST00000243082 PASKQ96RG2 1323 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 M0QYV0 167 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 RECQL4O94761 1208 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 AKR1A1P14550 325 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 CYP3A5P20815 502 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 GABRB2P47870 512 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 NFX1Q12986 1120 aaKnown RBP19.53■□□□□ 0.72
HOXC11-201ENST00000243082 MTMR3Q13615 1198 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 ZNF268Q14587 947 aaPredicted RBP19.53■□□□□ 0.72
HOXC11-201ENST00000243082 TXNRD3NBQ6F5E7 133 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 RCOR2Q8IZ40 523 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 TRIM6Q9C030 488 aaPredicted RBP19.53■□□□□ 0.72
HOXC11-201ENST00000243082 KLHL11Q9NVR0 708 aa19.53■□□□□ 0.72
HOXC11-201ENST00000243082 PIN4Q9Y237 131 aaKnown RBP19.53■□□□□ 0.72
HOXC11-201ENST00000243082 MYADML2A6NDP7 307 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 AKAP5P24588 427 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 GBP1P32455 592 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 LMAN1P49257 510 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 UBXN11Q5T124 520 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 BEST2Q8NFU1 509 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 FAM76AQ8TAV0 307 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 SLITRK1Q96PX8 696 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 NT5C1AQ9BXI3 368 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 RNF19AQ9NV58 838 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 WDR35Q9P2L0 1181 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 KIAA1257Q9ULG3 409 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 SCN1AP35498 2009 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 PI4K2BG5E9Z4 385 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 CRYBB1P53674 252 aaPredicted RBP19.52■□□□□ 0.72
HOXC11-201ENST00000243082 PDCLQ13371 301 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 LCLAT1Q6UWP7 414 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 NME8Q8N427 588 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 LRRC52Q8N7C0 313 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 C7orf31Q8N865 590 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 UBA3Q8TBC4 463 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 FNIP1Q8TF40 1166 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 UBLCP1Q8WVY7 318 aaPredicted RBP19.52■□□□□ 0.72
HOXC11-201ENST00000243082 ZIC5Q96T25 663 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 MRPL45Q9BRJ2 306 aaKnown RBP19.52■□□□□ 0.72
HOXC11-201ENST00000243082 SNX9Q9Y5X1 595 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 TLL2Q9Y6L7 1015 aa19.52■□□□□ 0.72
HOXC11-201ENST00000243082 DUSP11O75319 330 aaKnown RBP19.51■□□□□ 0.71
HOXC11-201ENST00000243082 KRT17Q04695 432 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 ADCY2Q08462 1091 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 SREBF2Q12772 1141 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 PPP1R7Q15435 360 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 CCNG2Q16589 344 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 MFSD7Q6UXD7 560 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 ARFGAP1Q8N6T3 406 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 OR2W6PQ8NHA6 318 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 ART4Q93070 314 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 MCRS1Q96EZ8 462 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 RBM41Q96IZ5 413 aaKnown RBP19.51■□□□□ 0.71
HOXC11-201ENST00000243082 APOL6Q9BWW8 343 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 SYNCQ9H7C4 482 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 HOMER3Q9NSC5 361 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 PARP2Q9UGN5 583 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 ATP8A1Q9Y2Q0 1164 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 GNAT1P11488 350 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 PSMA2P25787 234 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 TM4SF4P48230 202 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 SPDYCQ5MJ68 293 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 CEP85LQ5SZL2 805 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 C9orf57Q5W0N0 161 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 DPH6Q7L8W6 267 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 C12orf29Q8N999 325 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 ATL2Q8NHH9 583 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 METTL5Q9NRN9 209 aaKnown RBP19.51■□□□□ 0.71
HOXC11-201ENST00000243082 TSPAN16Q9UKR8 245 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 NME7Q9Y5B8 376 aa19.51■□□□□ 0.71
HOXC11-201ENST00000243082 SMIM28A0A1B0GU29 152 aa19.5■□□□□ 0.71
HOXC11-201ENST00000243082 KRT1P04264 644 aa19.5■□□□□ 0.71
HOXC11-201ENST00000243082 PFKMP08237 780 aa19.5■□□□□ 0.71
HOXC11-201ENST00000243082 C6orf222P0C671 652 aaPredicted RBP19.5■□□□□ 0.71
HOXC11-201ENST00000243082 XKR4Q5GH76 650 aa19.5■□□□□ 0.71
HOXC11-201ENST00000243082 RAPGEF5Q92565 580 aa19.5■□□□□ 0.71
HOXC11-201ENST00000243082 ARHGAP39Q9C0H5 1083 aa19.5■□□□□ 0.71
HOXC11-201ENST00000243082 UBQLN1Q9UMX0 589 aaKnown RBP19.5■□□□□ 0.71
HOXC11-201ENST00000243082 TP73O15350 636 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 CA12O43570 354 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 LRCH4O75427 683 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 KRT10P13645 584 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 CETN2P41208 172 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 ZNF844Q08AG5 666 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 PTK6Q13882 451 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 KCTD16Q68DU8 428 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 SYDE1Q6ZW31 735 aaPredicted RBP19.49■□□□□ 0.71
HOXC11-201ENST00000243082 EMC1Q8N766 993 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 GRK7Q8WTQ7 553 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 FAM118BQ9BPY3 351 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 EPB41L4BQ9H329 900 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 TMBIM4Q9HC24 238 aa19.49■□□□□ 0.71
HOXC11-201ENST00000243082 DDX56Q9NY93 547 aaKnown RBP19.49■□□□□ 0.71
HOXC11-201ENST00000243082 KLK14Q9P0G3 267 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms