RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 INTS6LQ5JSJ4 861 aaKnown RBP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 SPECC1LQ69YQ0 1117 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 SPATA31D4Q6ZUB0 917 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CACNA2D4Q7Z3S7 1137 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 ADGRD2Q7Z7M1 963 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 FAM71AQ8IYT1 594 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 DCP1BQ8IZD4 617 aaKnown RBP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 B3GALNT2Q8NCR0 500 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 MYCBPAPQ8TBZ2 947 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 MRFAP1L1Q96HT8 127 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 SPAG5Q96R06 1193 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CDX2Q99626 313 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 PKMYT1Q99640 499 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 SYT15Q9BQS2 421 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 GPR88Q9GZN0 384 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CEP72Q9P209 647 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 KIAA1257Q9ULG3 409 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 CAPN11Q9UMQ6 739 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 DAAM1Q9Y4D1 1078 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 MTCL1Q9Y4B5 1905 aaKnown RBP10.83□□□□□ -0.68
HMGCL-201ENST00000235958 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
HMGCL-201ENST00000235958 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 CLASP2O75122 1294 aaKnown RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 PAEPP09466 180 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 CPB1P15086 417 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 SOX5P35711 763 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 STAT1P42224 750 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 NRIP1P48552 1158 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 MRE11P49959 708 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 ZNF132P52740 706 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 PTK2Q05397 1052 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 MAPRE1Q15691 268 aaKnown RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 NFE2Q16621 373 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 MDH1BQ5I0G3 518 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 TPGS2Q68CL5 300 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 SMYD5Q6GMV2 418 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 RNF19BQ6ZMZ0 732 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 PPFIBP1Q86W92 1011 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 ATAD1Q8NBU5 361 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 RBBP8NLQ8NC74 664 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 SLC22A17Q8WUG5 538 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 TFAP2BQ92481 460 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 BAP1Q92560 729 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 PGLYRP2Q96PD5 576 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 GAS2L1Q99501 681 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 B3GNT5Q9BYG0 378 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 TTYH3Q9C0H2 523 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 NSUN3Q9H649 340 aaKnown RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 IGFLR1Q9H665 355 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 ACP6Q9NPH0 428 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 MTMR10Q9NXD2 777 aa10.82□□□□□ -0.68
HMGCL-201ENST00000235958 LUC7L2Q9Y383 392 aaKnown RBP10.82□□□□□ -0.68
HMGCL-201ENST00000235958 A0A1W2PQJ5 194 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 F8VZ95 297 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 CLDN5O00501 218 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 TGM5O43548 720 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 GFPT2O94808 682 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 VNN2O95498 520 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 C1RP00736 705 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 GYPCP04921 128 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 VDRP11473 427 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 ATF2P15336 505 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 CD19P15391 556 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 CYP2F1P24903 491 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 CASP14P31944 242 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 GTF2F1P35269 517 aaKnown RBP eCLIP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 CLCN4P51793 760 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 BPIFB4P59827 614 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 ZBED6P86452 979 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 CYP27A1Q02318 531 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 ARID5AQ03989 594 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 ADCY1Q08828 1119 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 SMARCB1Q12824 385 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 DUSP4Q13115 394 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 TBX2Q13207 712 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 DUSP6Q16828 381 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 TCEAL5Q5H9L2 206 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 PPP1R26Q5T8A7 1209 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 PAQR9Q6ZVX9 377 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 TMC6Q7Z403 805 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 IRF2BP2Q7Z5L9 587 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 SPATA2LQ8IUW3 424 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 DRC7Q8IY82 874 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 FUKQ8N0W3 1084 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 ZNF397Q8NF99 534 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 ZNF606Q8WXB4 792 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 MYLIPQ8WY64 445 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 PPP2R3CQ969Q6 453 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 IQCDQ96DY2 449 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 PCED1BQ96HM7 432 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 HNRNPABQ99729 332 aaKnown RBP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 FAM49BQ9NUQ9 324 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 AIPL1Q9NZN9 384 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 AFF4Q9UHB7 1163 aaKnown RBP10.81□□□□□ -0.68
HMGCL-201ENST00000235958 MYO6Q9UM54 1294 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 SLC27A5Q9Y2P5 690 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms