RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 HESX1Q9UBX0 185 aa25.18■■□□□ 1.62
RRP9-201ENST00000232888 TSPAN16Q9UKR8 245 aa25.18■■□□□ 1.62
RRP9-201ENST00000232888 TARSL2A2RTX5 802 aaKnown RBP25.17■■□□□ 1.62
RRP9-201ENST00000232888 TMEM191CA6NGB0 347 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 PEX5P50542 639 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 PTPN20Q4JDL3 420 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 GLE1Q53GS7 698 aaKnown RBP25.17■■□□□ 1.62
RRP9-201ENST00000232888 PPP1R15BQ5SWA1 713 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 PDCL2Q8N4E4 241 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 RNF169Q8NCN4 708 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 STK32AQ8WU08 396 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 PLVAPQ9BX97 442 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 CRISPLD2Q9H0B8 497 aa25.17■■□□□ 1.62
RRP9-201ENST00000232888 PARNO95453 639 aaKnown RBP25.16■■□□□ 1.62
RRP9-201ENST00000232888 PDCLQ13371 301 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 TUSC3Q13454 348 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 PTPROQ16827 1216 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 UPP1Q16831 310 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 PKDCCQ504Y2 493 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 C2CD6Q53TS8 623 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 IPO4Q8TEX9 1081 aaKnown RBP25.16■■□□□ 1.62
RRP9-201ENST00000232888 RUBCNQ92622 972 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 BTBD6Q96KE9 485 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 SYNCQ9H7C4 482 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 TMEM59LQ9UK28 342 aa25.16■■□□□ 1.62
RRP9-201ENST00000232888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.16■■□□□ 1.62
RRP9-201ENST00000232888 SIGLEC16A6NMB1 481 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 FGFR1P11362 822 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 H2AFXP16104 143 aaPredicted RBP25.15■■□□□ 1.62
RRP9-201ENST00000232888 MCM3P25205 808 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 LHX1P48742 406 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 AARSP49588 968 aaKnown RBP eCLIP25.15■■□□□ 1.62
RRP9-201ENST00000232888 GOLGA7BQ2TAP0 167 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 DCUN1D2Q6PH85 259 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 GLB1LQ6UWU2 654 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 ANKRD33Q7Z3H0 272 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 RTN4RL1Q86UN2 441 aaPredicted RBP25.15■■□□□ 1.62
RRP9-201ENST00000232888 APBB2Q92870 758 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 SENP8Q96LD8 212 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 ANKZF1Q9H8Y5 726 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 CYTH4Q9UIA0 394 aa25.15■■□□□ 1.62
RRP9-201ENST00000232888 ARHGEF37A1IGU5 675 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 GABRDO14764 452 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 CLCNKBP51801 687 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 AFF1P51825 1210 aaKnown RBP25.14■■□□□ 1.62
RRP9-201ENST00000232888 RWDD2BP57060 319 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 PSMC1P62191 440 aaKnown RBP25.14■■□□□ 1.62
RRP9-201ENST00000232888 C2orf54Q08AI8 447 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 PIGHQ14442 188 aaPredicted RBP25.14■■□□□ 1.62
RRP9-201ENST00000232888 PPP1R26Q5T8A7 1209 aaPredicted RBP25.14■■□□□ 1.62
RRP9-201ENST00000232888 PHLDB2Q86SQ0 1253 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 C12orf29Q8N999 325 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 FNIP1Q8TF40 1166 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 ALG3Q92685 438 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 CPXM1Q96SM3 734 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 PARD6BQ9BYG5 372 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 ELAC1Q9H777 363 aaKnown RBP25.14■■□□□ 1.62
RRP9-201ENST00000232888 KANSL3Q9P2N6 904 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 RAB21Q9UL25 225 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 NME7Q9Y5B8 376 aa25.14■■□□□ 1.62
RRP9-201ENST00000232888 CCDC188H7C350 402 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 PPP2R5EQ16537 467 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 C1orf53Q5VUE5 145 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 NIPA2Q8N8Q9 360 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 SEPT8Q92599 483 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 RNPC3Q96LT9 517 aaKnown RBP25.14■■□□□ 1.61
RRP9-201ENST00000232888 TOX2Q96NM4 488 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 CYLDQ9NQC7 956 aa25.14■■□□□ 1.61
RRP9-201ENST00000232888 PSTPIP1O43586 416 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 PLEKHG4Q58EX7 1191 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 DCAF12L1Q5VU92 463 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 LLGL2Q6P1M3 1020 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 CTU1Q7Z7A3 348 aaKnown RBP25.13■■□□□ 1.61
RRP9-201ENST00000232888 XYLT1Q86Y38 959 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 ANKRD52Q8NB46 1076 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 UBA3Q8TBC4 463 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 KRT35Q92764 455 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 MCRS1Q96EZ8 462 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 TRIM7Q9C029 511 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 RBM12Q9NTZ6 932 aaKnown RBP25.13■■□□□ 1.61
RRP9-201ENST00000232888 TMEM161AQ9NX61 479 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 EHD2Q9NZN4 543 aa25.13■■□□□ 1.61
RRP9-201ENST00000232888 PFKMP08237 780 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 RHOXF2BP0C7M4 288 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 KRT3P12035 628 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 LMO2P25791 158 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 BCAT1P54687 386 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 BRD3Q15059 726 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 CYP4A22Q5TCH4 519 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 SEL1L2Q5TEA6 688 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 DSTYKQ6XUX3 929 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 SLC39A5Q6ZMH5 540 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 MTERF4Q7Z6M4 381 aaKnown RBP25.12■■□□□ 1.61
RRP9-201ENST00000232888 URGCPQ8TCY9 931 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 SLC35F5Q8WV83 523 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 LINC01599Q8WXQ3 324 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 RHOXF2Q9BQY4 288 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 SLC4A5Q9BY07 1137 aa25.12■■□□□ 1.61
RRP9-201ENST00000232888 RNF216Q9NWF9 866 aaPredicted RBP25.12■■□□□ 1.61
RRP9-201ENST00000232888 SMARCAL1Q9NZC9 954 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms