RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 CLUHO75153 1309 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 OPHN1O60890 802 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 PTK7Q13308 1070 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 LAMB3Q13751 1172 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 C1orf146Q5VVC0 180 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 SPOCD1Q6ZMY3 1216 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 FBXO27Q8NI29 283 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 CFAP36Q96G28 342 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 RABGEF1Q9UJ41 708 aa13.27□□□□□ -0.28
PITRM1-201ENST00000224949 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 MEI4A8MW99 385 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 TXNDC9O14530 226 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 ALOX15BO15296 676 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 LIG4P49917 911 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 TMPRSS15P98073 1019 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 CDK16Q00536 496 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 AOC3Q16853 763 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 RNASEH2BQ5TBB1 312 aaKnown RBP13.27□□□□□ -0.29
PITRM1-201ENST00000224949 OR52E8Q6IFG1 317 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 DNAJC24Q6P3W2 148 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.29
PITRM1-201ENST00000224949 GPD1LQ8N335 351 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 TMEM161BQ8NDZ6 487 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 BSNDQ8WZ55 320 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 RIT2Q99578 217 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 ZNF184Q99676 751 aaPredicted RBP13.27□□□□□ -0.29
PITRM1-201ENST00000224949 ZNF395Q9H8N7 513 aaPredicted RBP13.27□□□□□ -0.29
PITRM1-201ENST00000224949 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 LNPEPQ9UIQ6 1025 aa13.27□□□□□ -0.29
PITRM1-201ENST00000224949 TCRBV7S3A2A0A539 114 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 MAGEA13PA6NCF6 341 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 RANBP1P43487 201 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 RPS6KA3P51812 740 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SMAD1Q15797 465 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 FOXB2Q5VYV0 432 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 RCOR2Q8IZ40 523 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ARHGAP24Q8N264 748 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ACTL9Q8TC94 416 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 CHURC1Q8WUH1 139 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SHCBP1LQ9BZQ2 653 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 COL20A1Q9P218 1284 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 FAM155BO75949 473 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 VCPP55072 806 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 BPIFB4P59827 614 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 NOMO3P69849 1222 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 OTUD4Q01804 1114 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 TATDN1Q6P1N9 297 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 C12orf56Q8IXR9 622 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SP8Q8IXZ3 490 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 CEP120Q8N960 986 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 CCDC110Q8TBZ0 833 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SH3TC2Q8TF17 1288 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 FAM136AQ96C01 138 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 OXNAD1Q96HP4 312 aaPredicted RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ACAP3Q96P50 834 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SCAF8Q9UPN6 1271 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SCINQ9Y6U3 715 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ADAMTSL1Q8N6G6 1762 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 I3L4J1 428 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 CST8O60676 142 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 GCLCP48506 637 aaPredicted RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 FAAP100Q0VG06 881 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 SLC39A4Q6P5W5 647 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 RGS9BPQ6ZS82 235 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 TDRPQ86YL5 185 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 PDIK1LQ8N165 341 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ZNF516Q92618 1163 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 CCDC124Q96CT7 223 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ZDHHC15Q96MV8 337 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 FOXP3Q9BZS1 431 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 PARVAQ9NVD7 372 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 IP6K2Q9UHH9 426 aa13.26□□□□□ -0.29
PITRM1-201ENST00000224949 XPO7Q9UIA9 1087 aaKnown RBP13.26□□□□□ -0.29
PITRM1-201ENST00000224949 ASTN2O75129 1339 aaPredicted RBP13.25□□□□□ -0.29
PITRM1-201ENST00000224949 KLHL33A6NCF5 533 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 TRAFD1O14545 582 aaPredicted RBP13.25□□□□□ -0.29
PITRM1-201ENST00000224949 GCNT1Q02742 428 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 CUL3Q13618 768 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 FAM71DQ8N9W8 422 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 SMC1BQ8NDV3 1235 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 CYLDQ9NQC7 956 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 SERPINA10Q9UK55 444 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 MTO1Q9Y2Z2 717 aaKnown RBP13.25□□□□□ -0.29
PITRM1-201ENST00000224949 ASB3Q9Y575 518 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 HNRNPCL1O60812 293 aaKnown RBP13.25□□□□□ -0.29
PITRM1-201ENST00000224949 GSTT1P30711 240 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 EPHB1P54762 984 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 WNT7BP56706 349 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 TRAF1Q13077 416 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 KLHL38Q2WGJ6 581 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
PITRM1-201ENST00000224949 EFHC2Q5JST6 749 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms