RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 C12orf29Q8N999 325 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 SLC30A5Q8TAD4 765 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 HEXIM2Q96MH2 286 aaKnown RBP14.93□□□□□ -0.02
SEC61B-201ENST00000223641 AGPAT1Q99943 283 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 SYT15Q9BQS2 421 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 DNAI2Q9GZS0 605 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 ZCWPW1Q9H0M4 648 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 KCNF1Q9H3M0 494 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 NHEJ1Q9H9Q4 299 aaPredicted RBP14.93□□□□□ -0.02
SEC61B-201ENST00000223641 MTRRQ9UBK8 725 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 MSRAQ9UJ68 235 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 PCDHGC3Q9UN70 934 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 IRAK3Q9Y616 596 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 PTPRDP23468 1912 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 CHD7Q9P2D1 2997 aa14.93□□□□□ -0.02
SEC61B-201ENST00000223641 MYBPHLA2RUH7 354 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 BRD2P25440 801 aaKnown RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 EIF4A3P38919 411 aaKnown RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 GLUD2P49448 558 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 PKDCCQ504Y2 493 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 TDRD12Q587J7 1177 aaKnown RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 PPP1R26Q5T8A7 1209 aaPredicted RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 SLC8B1Q6J4K2 584 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 LCLAT1Q6UWP7 414 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 RSPO2Q6UXX9 243 aaPredicted RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 PAQR9Q6ZVX9 377 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 LRRTM3Q86VH5 581 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 MYCBPAPQ8TBZ2 947 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 SLC20A1Q8WUM9 679 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 CYFIP2Q96F07 1278 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 TMEM209Q96SK2 561 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 HNRNPABQ99729 332 aaKnown RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 LPIN3Q9BQK8 851 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 C11orf84Q9BUA3 381 aaPredicted RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 NKX2-4Q9H2Z4 354 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 RXFP1Q9HBX9 757 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 FNIP2Q9P278 1114 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 PUF60Q9UHX1 559 aaKnown RBP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 GTF3C4Q9UKN8 822 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 NENFQ9UMX5 172 aa14.92□□□□□ -0.02
SEC61B-201ENST00000223641 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.92□□□□□ -0.02
SEC61B-201ENST00000223641 H3BNC9 293 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 DDX3XO00571 662 aaKnown RBP eCLIP14.91□□□□□ -0.026e-18■■■□□ 16.3
SEC61B-201ENST00000223641 THAP12O43422 761 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 MED7O43513 233 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 LCA5LO95447 670 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 MMEP08473 750 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 CFHP08603 1231 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 DNAJB1P25685 340 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 CDH5P33151 784 aaPredicted RBP14.91□□□□□ -0.02
SEC61B-201ENST00000223641 PSMC1P62191 440 aaKnown RBP14.91□□□□□ -0.02
SEC61B-201ENST00000223641 TSPY1Q01534 308 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 CAMK1Q14012 370 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 MAPRE1Q15691 268 aaKnown RBP14.91□□□□□ -0.02
SEC61B-201ENST00000223641 PSMD5Q16401 504 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 LRIT3Q3SXY7 679 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 CTXN3Q4LDR2 81 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 KIAA1841Q6NSI8 718 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 PRSS55Q6UWB4 352 aaPredicted RBP14.91□□□□□ -0.02
SEC61B-201ENST00000223641 RAD9BQ6WBX8 426 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 FUKQ8N0W3 1084 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 FBXO22Q8NEZ5 403 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 RIN2Q8WYP3 895 aaPredicted RBP14.91□□□□□ -0.02
SEC61B-201ENST00000223641 PCED1BQ96HM7 432 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 PCDHB18PQ96TA0 734 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 CLSTN3Q9BQT9 956 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 LHX5Q9H2C1 402 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 ALG13Q9NP73 1137 aaKnown RBP14.91□□□□□ -0.02
SEC61B-201ENST00000223641 TMLHEQ9NVH6 421 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 ADAMTS1Q9UHI8 967 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 SSX2IPQ9Y2D8 614 aa14.91□□□□□ -0.02
SEC61B-201ENST00000223641 A0A087X0T9 212 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 SOWAHDA6NJG2 315 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 ARHGAP6O43182 974 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 CYP1A1P04798 512 aaPredicted RBP14.9□□□□□ -0.02
SEC61B-201ENST00000223641 URODP06132 367 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 FAM228BP0C875 321 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 GZMAP12544 262 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 UNGP13051 313 aaPredicted RBP14.9□□□□□ -0.02
SEC61B-201ENST00000223641 CD19P15391 556 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 TNFAIP3P21580 790 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 DNAJB2P25686 324 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 ERVFC1P60507 584 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 SMARCB1Q12824 385 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 GPR17Q13304 367 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 SLC18A3Q16572 532 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 CCDC142Q17RM4 750 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 HS1BP3Q53T59 392 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 MDH1BQ5I0G3 518 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 TAF3Q5VWG9 929 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 PPP2R2DQ66LE6 453 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 PALB2Q86YC2 1186 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 GLYCTKQ8IVS8 523 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 DCP1BQ8IZD4 617 aaKnown RBP14.9□□□□□ -0.02
SEC61B-201ENST00000223641 POF1BQ8WVV4 589 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 CCDC42Q96M95 316 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 B3GNT5Q9BYG0 378 aa14.9□□□□□ -0.02
SEC61B-201ENST00000223641 SLC28A3Q9HAS3 691 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms