RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ICAM3P32942 547 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 OTUD4Q01804 1114 aaKnown RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 STAT4Q14765 748 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 PWP2Q15269 919 aaKnown RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 FBXO16Q8IX29 292 aaPredicted RBP15.41■□□□□ 0.06
CNOT3-201ENST00000221232 ARFGAP1Q8N6T3 406 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 BBOF1Q8ND07 529 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 DNERQ8NFT8 737 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 ACTL9Q8TC94 416 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 PITPNM3Q9BZ71 974 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 CNTN6Q9UQ52 1028 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 CEP83Q9Y592 693 aa15.41■□□□□ 0.06
CNOT3-201ENST00000221232 IGKV6D-21A0A0A0MT36 114 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 RFC5P40937 340 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 CDKN2BP42772 138 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 XRCC4Q13426 336 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 SH3PXD2AQ5TCZ1 1133 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 CGB2Q6NT52 195 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 ARHGEF18Q6ZSZ5 1173 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 ZBTB8OSQ8IWT0 167 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 FITM2Q8N6M3 262 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 CHST13Q8NET6 341 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 CFAP57Q96MR6 1250 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 TWNKQ96RR1 684 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 ALG13Q9NP73 1137 aaKnown RBP15.4■□□□□ 0.06
CNOT3-201ENST00000221232 METTL5Q9NRN9 209 aaKnown RBP15.4■□□□□ 0.06
CNOT3-201ENST00000221232 RNF19AQ9NV58 838 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 TCRBV7S3A2A0A539 114 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 FZD9O00144 591 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
CNOT3-201ENST00000221232 GHRP10912 638 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 RPA3P35244 121 aaPredicted RBP15.4■□□□□ 0.06
CNOT3-201ENST00000221232 LBX2Q6XYB7 198 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 APOBEC3FQ8IUX4 373 aaKnown RBP15.4■□□□□ 0.06
CNOT3-201ENST00000221232 MAML1Q92585 1016 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 PRCCQ92733 491 aaPredicted RBP15.4■□□□□ 0.06
CNOT3-201ENST00000221232 CPXM1Q96SM3 734 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 SPATC1LQ9H0A9 340 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 TRABDQ9H4I3 376 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 ELP3Q9H9T3 547 aa15.4■□□□□ 0.06
CNOT3-201ENST00000221232 A8MUI8 341 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 CHUKO15111 745 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 HOXC6P09630 235 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 IQCF3P0C7M6 154 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 ASPAP45381 313 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 VCPP55072 806 aaKnown RBP15.39■□□□□ 0.05
CNOT3-201ENST00000221232 NEDD9Q14511 834 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 MSS51Q4VC12 460 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 FNBP1LQ5T0N5 605 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 ATF7IP2Q5U623 682 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 SPATA33Q96N06 139 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 SMYD3Q9H7B4 428 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 PDGFCQ9NRA1 345 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 CPSF3Q9UKF6 684 aaKnown RBP15.39■□□□□ 0.05
CNOT3-201ENST00000221232 SLC12A4Q9UP95 1085 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 DNAJC8O75937 253 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-201ENST00000221232 TNNC2P02585 160 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 NFICP08651 508 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 TAC1P20366 129 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 CTCFP49711 727 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-201ENST00000221232 LMNB2Q03252 620 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 MGAT5Q09328 741 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 MMRN1Q13201 1228 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 TFDP1Q14186 410 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 CDO1Q16878 200 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 EFCAB12Q6NXP0 572 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 NPNTQ6UXI9 565 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 ZPBP2Q6X784 338 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 ZC3H18Q86VM9 953 aaKnown RBP15.39■□□□□ 0.05
CNOT3-201ENST00000221232 RFX6Q8HWS3 928 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 KCTD6Q8NC69 237 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 CPB2Q96IY4 423 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 SDCBP2Q9H190 292 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 XYLT2Q9H1B5 865 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 L3MBTL1Q9Y468 752 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
CNOT3-201ENST00000221232 TCRBV5S1A1TA0A578 114 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 FAM47DPA6NHR8 397 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
CNOT3-201ENST00000221232 IRF6O14896 467 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 LRCH4O75427 683 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 CA4P22748 312 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 ABCD1P33897 745 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 PIGHQ14442 188 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-201ENST00000221232 Q3C1V9 767 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 BBS9Q3SYG4 887 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 IER5Q5VY09 327 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 METTL7BQ6UX53 244 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 UNC45BQ8IWX7 931 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 UBR7Q8N806 425 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 FAM71DQ8N9W8 422 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 PPP1R13LQ8WUF5 828 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 CLMNQ96JQ2 1002 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 GRID1Q9ULK0 1009 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 ADM5C9JUS6 153 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 ITGB3P05106 788 aa15.38■□□□□ 0.05
CNOT3-201ENST00000221232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms