RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 DCTN4Q9UJW0 460 aa11.09□□□□□ -0.63
VPS18-201ENST00000220509 BRWD3Q6RI45 1802 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 ATP9BO43861 1147 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 SPATA31C1P0DKV0 1188 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 RFX1P22670 979 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 MTTPP55157 894 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 COPS2P61201 443 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 MTM1Q13496 603 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 TMED2Q15363 201 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 ARSHQ5FYA8 562 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 SLC20A1Q8WUM9 679 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 BAP1Q92560 729 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 RUBCNQ92622 972 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CASP10Q92851 521 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 VCXQ9H320 206 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 HAO1Q9UJM8 370 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 DSEQ9UL01 958 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CHD4Q14839 1912 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 THSD7AQ9UPZ6 1657 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 SPTLC1O15269 473 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CCND1P24385 295 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CIITAP33076 1130 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 C6orf118Q5T5N4 469 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 VPS52Q8N1B4 723 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CYTH2Q99418 400 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 AGO4Q9HCK5 861 aaKnown RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 ATAD3AQ9NVI7 634 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 MGRN1O60291 552 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 SGPL1O95470 568 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CREB1P16220 341 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 PSMA2P25787 234 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 BLMHQ13867 455 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 OLFML2BQ68BL8 750 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 ALKBH2Q6NS38 261 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 ANKK1Q8NFD2 765 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 GSDMBQ8TAX9 411 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 TAS1R2Q8TE23 839 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 P3H4Q92791 437 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 ZNF570Q96NI8 536 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 MRPL4Q9BYD3 311 aaKnown RBP11.08□□□□□ -0.64
VPS18-201ENST00000220509 WDR35Q9P2L0 1181 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
VPS18-201ENST00000220509 HTR3EA5X5Y0 456 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 HLA-DRAP01903 254 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 TMEM253P0C7T8 217 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 ITGB5P18084 799 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 RALGDSQ12967 914 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 RCN2Q14257 317 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 WDR72Q3MJ13 1102 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 PPFIBP2Q8ND30 876 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 SLC5A5Q92911 643 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 FAM167AQ96KS9 214 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 MMP19Q99542 508 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 PXMP2Q9NR77 195 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 ANKEF1Q9NU02 776 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 TMCO1Q9UM00 188 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 PODXLO00592 558 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 TCF7P36402 384 aaPredicted RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 PGM5Q15124 567 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 CATSPER4Q7RTX7 472 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 MAP7D3Q8IWC1 876 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 CD302Q8IX05 232 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 LRRC15Q8TF66 581 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 RAB3IPQ96QF0 476 aaPredicted RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 GMLQ99445 158 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 IER2Q9BTL4 223 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 MED10Q9BTT4 135 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 ALG13Q9NP73 1137 aaKnown RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 GPRC5DQ9NZD1 345 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 PABPN1LA6NDY0 278 aaKnown RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 GOLGA8MH3BSY2 632 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 M0QZ92 97 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 PIK3R2O00459 728 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 CAPN9O14815 690 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 PSMD10O75832 226 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 PGK2P07205 417 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 RFC5P40937 340 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 SNX16P57768 344 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 NCOA4Q13772 614 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 DUOXA2Q1HG44 320 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 SLC2A7Q6PXP3 512 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 C1orf186Q6ZWK4 172 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
VPS18-201ENST00000220509 JAMLQ86YT9 394 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 KCTD6Q8NC69 237 aa11.07□□□□□ -0.64
VPS18-201ENST00000220509 HSPH1Q92598 858 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms