RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 USP37Q86T82 979 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 XXYLT1Q8NBI6 393 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 DHX38Q92620 1227 aaKnown RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 GFM2Q969S9 779 aaKnown RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 FAM81BQ96LP2 452 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 GPR101Q96P66 508 aaPredicted RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 ATP8B3O60423 1300 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 CAPN8A6NHC0 703 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 MAGEB3O15480 346 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 MAGEC1O60732 1142 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 VIL1P09327 827 aaKnown RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 MLH1P40692 756 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 NT5C2P49902 561 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 ACTR3P61158 418 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 ITGA9Q13797 1035 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 RARS2Q5T160 578 aaKnown RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 TMEM63BQ5T3F8 832 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 KRT80Q6KB66 452 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 SLF2Q8IX21 1173 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 FBXO36Q8NEA4 188 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 PTCD3Q96EY7 689 aaKnown RBP10.54□□□□□ -0.72
CLDN18-201ENST00000183605 TMEM121Q9BTD3 319 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 KCNQ5Q9NR82 932 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 C1orf112Q9NSG2 853 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 NENFQ9UMX5 172 aa10.54□□□□□ -0.72
CLDN18-201ENST00000183605 CHD4Q14839 1912 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PRR5-ARHGAP8B1AHC4 643 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 NOP56O00567 594 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 KRT37O76014 449 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 AKR1B1P15121 316 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 ARHGAP8P85298 464 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 KRT72Q14CN4 511 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SIX1Q15475 284 aaPredicted RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 ANKRD20A4Q4UJ75 823 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SFT2D3Q587I9 215 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PPP4R1Q8TF05 950 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 CCT7Q99832 543 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PPCSQ9HAB8 311 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 S100A14Q9HCY8 104 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 MRPL47Q9HD33 250 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 MTMR4Q9NYA4 1195 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 CIDEBQ9UHD4 219 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SBF2Q86WG5 1849 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 TISP43B9A030 160 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 EIF3DO15371 548 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PROCP04070 461 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 C6orf222P0C671 652 aaPredicted RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SRGAP2CP0DJJ0 459 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SRGAP2BP0DMP2 458 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 IVDP26440 423 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 HADHBP55084 474 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PPP3CAQ08209 521 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 TMEM62Q0P6H9 643 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 UBAP2LQ14157 1087 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PABPC1LQ4VXU2 614 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 HSPBAP1Q96EW2 488 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PFDN4Q9NQP4 134 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 A0A0J9YVX5 310 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SPDYE16A6NNV3 312 aaPredicted RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 TRIM49D1C9J1S8 452 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PDLIM1O00151 329 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 TMED10P49755 219 aaKnown RBP10.53□□□□□ -0.72
CLDN18-201ENST00000183605 COPAP53621 1224 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 HYIQ5T013 277 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 RSPH3Q86UC2 560 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 FBXO27Q8NI29 283 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 FAM20AQ96MK3 541 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 NACC1Q96RE7 527 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 HAPLN3Q96S86 360 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 SH2D3AQ9BRG2 576 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 MECRQ9BV79 373 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 ZNF180Q9UJW8 692 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 PACSIN3Q9UKS6 424 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 MAD1L1Q9Y6D9 718 aa10.53□□□□□ -0.72
CLDN18-201ENST00000183605 ZNF862O60290 1169 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 CYP1A2P05177 515 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 CRABP2P29373 138 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 CCR3P51677 355 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 FMO1Q01740 532 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 STX3Q13277 289 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 MORF4L2Q15014 288 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
CLDN18-201ENST00000183605 KLHDC10Q6PID8 442 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 ZNF720Q7Z2F6 126 aa10.52□□□□□ -0.73
CLDN18-201ENST00000183605 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms