RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ZNF790Q6PG37 636 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CHSY1Q86X52 802 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 STX12Q86Y82 276 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GLYCTKQ8IVS8 523 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 WWOXQ9NZC7 414 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PLA2G4BP0C869 781 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CAV1Q03135 178 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FNDC3BQ53EP0 1204 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 CDC73Q6P1J9 531 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MSANTD1Q6ZTZ1 278 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 KCTD1Q719H9 257 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 AMIGO1Q86WK6 493 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ZNF227Q86WZ6 799 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 LRRC49Q8IUZ0 686 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RSPH9Q9H1X1 276 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 RIBC2Q9H4K1 309 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SAR1BQ9Y6B6 198 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MICAL2O94851 1124 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MARSP56192 900 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 COX10Q12887 443 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 BTG3Q14201 252 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 CACHD1Q5VU97 1274 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FAM171BQ6P995 826 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 HAVCR1Q96D42 359 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MTERF3Q96E29 417 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 QRFPRQ96P65 431 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ELL3Q9HB65 397 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 KIAA1107Q9UPP5 1409 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CTSHP09668 335 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CYP2A7P20853 494 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MAP2K2P36507 400 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GPD2P43304 727 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ZNF618Q5T7W0 954 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 EXOC3L1Q86VI1 746 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RIN3Q8TB24 985 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SGCDQ92629 289 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 DHX35Q9H5Z1 703 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 RMND5AQ9H871 391 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 DNAJC28Q9NX36 388 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MANSC4A6NHS7 340 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 KIAA0391O15091 583 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 TM9SF1O15321 606 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 STX7O15400 261 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 NR2F2P24468 414 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ACTR3P61158 418 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 KLC1Q07866 573 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GALNT18Q6P9A2 607 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CHRDL2Q6WN34 429 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 LRRC8DQ7L1W4 858 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 REM2Q8IYK8 340 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 BSNDQ8WZ55 320 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ARHGEF38Q9NXL2 777 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 DSEQ9UL01 958 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 HEY1Q9Y5J3 304 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 H3BNH8 94 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MSCO60682 206 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PAICSP22234 425 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 PTK6Q13882 451 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FAM83BQ5T0W9 1011 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RINLQ6ZS11 566 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 LIX1Q8N485 282 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CARNMT1Q8N4J0 409 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MYRIPQ8NFW9 859 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 BHMT2Q9H2M3 363 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SPG21Q9NZD8 308 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 TOPBP1Q92547 1522 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 A0A087WZ62 844 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 WASHC1A8K0Z3 465 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 WASH3PC4AMC7 463 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SOAT2O75908 522 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 EIF4BP23588 611 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 MECP2P51608 486 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 WASH2PQ6VEQ5 465 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 KIAA1143Q96AT1 154 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 RASSF1Q9NS23 344 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 IP6K2Q9UHH9 426 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ADGRG1Q9Y653 693 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RIMS2Q9UQ26 1411 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CASKO14936 926 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RPS6KB1P23443 525 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 NOS3P29474 1203 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 BROXQ5VW32 411 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 DNAJC10Q8IXB1 793 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 HPS4Q9NQG7 708 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 INTS9Q9NV88 658 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 IMPAD1Q9NX62 359 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PDZK1P1A8MUH7 402 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 C1QTNF3-AMACRE9PGA6 284 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MAPK13O15264 365 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CTIFO43310 598 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 HTR1BP28222 390 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PBLDP30039 288 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 ITGA8P53708 1063 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FOXK1P85037 733 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ASZ1Q8WWH4 475 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GAL3ST3Q96A11 431 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 REPS1Q96D71 796 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms