RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 SPP2Q13103 211 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 FBXO41Q8TF61 875 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 BTBD10Q9BSF8 475 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 COL20A1Q9P218 1284 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 SEPT9Q9UHD8 586 aaPredicted RBP17.59■□□□□ 0.41
CTDP1-201ENST00000075430 SCN7AQ01118 1682 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 DNALI1O14645 258 aaPredicted RBP17.59■□□□□ 0.41
CTDP1-201ENST00000075430 PDE5AO76074 875 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 PYGLP06737 847 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 CIITAP33076 1130 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 DDX60LQ5H9U9 1706 aaKnown RBP17.59■□□□□ 0.41
CTDP1-201ENST00000075430 RGS9BPQ6ZS82 235 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 RSPH3Q86UC2 560 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 NETO2Q8NC67 525 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 TJP2Q9UDY2 1190 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 LRRC42Q9Y546 428 aa17.59■□□□□ 0.41
CTDP1-201ENST00000075430 TOM1L1O75674 476 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 PSMG1O95456 288 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 ZRSR2Q15696 482 aaKnown RBP17.58■□□□□ 0.41
CTDP1-201ENST00000075430 DNAJC24Q6P3W2 148 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 MOXD1Q6UVY6 613 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 KBTBD2Q8IY47 623 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.58■□□□□ 0.41
CTDP1-201ENST00000075430 SLC26A7Q8TE54 656 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 ETAA1Q9NY74 926 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 SLC4A7Q9Y6M7 1214 aa17.58■□□□□ 0.41
CTDP1-201ENST00000075430 E5RJQ4 531 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 CSDE1O75534 798 aaKnown RBP17.58■□□□□ 0.4
CTDP1-201ENST00000075430 GRAP2O75791 330 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 F7P08709 466 aaPredicted RBP17.58■□□□□ 0.4
CTDP1-201ENST00000075430 OTUD4Q01804 1114 aaKnown RBP17.58■□□□□ 0.4
CTDP1-201ENST00000075430 PTK7Q13308 1070 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 MAMLD1Q13495 774 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 RASA2Q15283 850 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 RFX6Q8HWS3 928 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 EGFL6Q8IUX8 553 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 ZCCHC9Q8N567 271 aaKnown RBP17.58■□□□□ 0.4
CTDP1-201ENST00000075430 ZNF333Q96JL9 665 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 TMEM8AQ9HCN3 771 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 GJA3Q9Y6H8 435 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 CD48P09326 243 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 MAN1A1P33908 653 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 SERPINB6P35237 376 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 CAV1Q03135 178 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 BTKQ06187 659 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 NMD3Q96D46 503 aaKnown RBP17.58■□□□□ 0.4
CTDP1-201ENST00000075430 PDGFDQ9GZP0 370 aaPredicted RBP17.58■□□□□ 0.4
CTDP1-201ENST00000075430 GABBR1Q9UBS5 961 aa17.58■□□□□ 0.4
CTDP1-201ENST00000075430 SORBS2O94875 1100 aaKnown RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 GTF2H1P32780 548 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 MSX2P35548 267 aaPredicted RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 NOVP48745 357 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 GEMIN4P57678 1058 aaKnown RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 GPX6P59796 221 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 LAMB3Q13751 1172 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 SCYL2Q6P3W7 929 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 DDX1Q92499 740 aaKnown RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 TAAR1Q96RJ0 339 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 MMP19Q99542 508 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 APOL6Q9BWW8 343 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 AK5Q9Y6K8 562 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 LIASO43766 372 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 GRIN3BO60391 1043 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 TJP3O95049 919 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 KRT19P08727 400 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 RAB27AP51159 221 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 UBAP2LQ14157 1087 aaKnown RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 C1orf228Q6PIY5 440 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 NPNTQ6UXI9 565 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 TEX9Q8N6V9 391 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 BBOF1Q8ND07 529 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 MORC4Q8TE76 937 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 XPO7Q9UIA9 1087 aaKnown RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 HEY1Q9Y5J3 304 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 AHDC1Q5TGY3 1603 aaPredicted RBP17.57■□□□□ 0.4
CTDP1-201ENST00000075430 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
CTDP1-201ENST00000075430 CIB2O75838 187 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 GMPRP36959 345 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 NLRP11P59045 1033 aaKnown RBP17.56■□□□□ 0.4
CTDP1-201ENST00000075430 TAF5Q15542 800 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 PARP6Q2NL67 630 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 KBTBD12Q3ZCT8 623 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 SWSAP1Q6NVH7 229 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 PRPF39Q86UA1 669 aaKnown RBP17.56■□□□□ 0.4
CTDP1-201ENST00000075430 MXRA8Q9BRK3 442 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 KANSL3Q9P2N6 904 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 ZNF70Q9UC06 446 aaPredicted RBP17.56■□□□□ 0.4
CTDP1-201ENST00000075430 SMG5Q9UPR3 1016 aaKnown RBP17.56■□□□□ 0.4
CTDP1-201ENST00000075430 SLC25A3Q00325 362 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 EN1Q05925 392 aaPredicted RBP17.56■□□□□ 0.4
CTDP1-201ENST00000075430 SLC34A1Q06495 639 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 PPP6R3Q5H9R7 873 aaPredicted RBP17.56■□□□□ 0.4
CTDP1-201ENST00000075430 MROH9Q5TGP6 573 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 ZNF516Q92618 1163 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 PCDHB2Q9Y5E7 798 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 ELK3P41970 407 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 C6orf163Q5TEZ5 329 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 LPCAT4Q643R3 524 aa17.56■□□□□ 0.4
CTDP1-201ENST00000075430 C12orf50Q8NA57 414 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms