RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Socs4Q91ZA6 436 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Slc26a3Q9WVC8 757 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Kcnd2Q9Z0V2 630 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 ThadaA8C756 1938 aa10.52□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ctnnal1O88327 731 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Actn3O88990 900 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Itm2bO89051 266 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 EmbP21995 330 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 PomkQ3TUA9 349 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Prss36Q5K2P8 849 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tmem199Q5SYH2 208 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Olfr8Q60892 310 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Olfr212Q7TS33 327 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ppfibp1Q8C8U0 969 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Q922C1 641 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Q9D4A5 307 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ralgapa2A3KGS3 1872 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 CitP49025 2055 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tldc2A2ACG1 198 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ptgs1P22437 602 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 UrosP51163 265 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ttf2Q5NC05 1138 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ddx3yQ62095 658 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dnajc16Q80TN4 772 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Myef2Q8C854 591 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Eif2b5Q8CHW4 717 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Snx9Q91VH2 595 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gtf3c6Q9D8P7 227 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gdap2Q9DBL2 498 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 EmcnQ9R0H2 261 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Myh10Q61879 1976 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Kcnt2D3Z649 1135 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 CaluO35887 315 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trim30aP15533 496 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cpa4Q6P8K8 420 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Prl3a1Q78Y73 227 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cfap100Q80VN0 613 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tmco3Q8BH01 678 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Klhl36Q8R124 613 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Chn1Q91V57 459 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Slc13a3Q91Y63 600 aa10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rpf2Q9JJ80 306 aaKnown RBP10.51□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Malrd1A2AJX4 2123 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm45861A0A1B0GRY3 1923 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Pola2P33611 600 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 AdkP55264 361 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Stip1Q60864 543 aaKnown RBP10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Lrrn2Q6PHP6 730 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fndc3aQ8BX90 1198 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Vmn1r213Q8R278 384 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tcf25Q8R3L2 676 aaKnown RBP10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fgf22Q9ESS2 162 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mtmr7Q9Z2C9 660 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Irs2P81122 1321 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Igkv18-36A0A075B5M9 114 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 PrphP15331 475 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Adcy6Q01341 1165 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Aarsd1Q3THG9 412 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Vps72Q62481 368 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rsl1d1Q8BVY0 452 aaKnown RBP10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Uap1Q91YN5 522 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rnf14Q9JI90 485 aa10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Sf3b1Q99NB9 1304 aaKnown RBP10.5□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tmem240B2RWJ3 173 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ldlrad1D3YYZ1 218 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Spata31E9QAF0 1014 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm11236J3QMS7 360 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Acot1O55137 419 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 MsnP26041 577 aaKnown RBP10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Bmpr1aP36895 532 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Nkx2-5P42582 318 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zfp251Q6PCX8 632 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 SpopQ6ZWS8 374 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fam102aQ78T81 392 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 A430089I19RikQ8C9W1 407 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Lrrc57Q9D1G5 239 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Atad1Q9D5T0 361 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Samd1D3YXK1 519 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ccdc121E9Q6D3 323 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Hes2O54792 157 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gp6P0C191 313 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gp1bbP56400 206 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ttc39dQ0VF76 604 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Pik3r6Q3U6Q4 756 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tars2Q3UQ84 723 aaKnown RBP10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zfp658Q5PPQ4 887 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ccdc125Q5U465 500 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Maats1Q8BRC6 783 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zmym6Q8BS54 1249 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Slfn5Q8CBA2 884 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Vps18Q8R307 973 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Srgap2Q91Z67 1071 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rpa3Q9CQ71 121 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ergic2Q9CR89 377 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Oxct2bQ9ESL0 520 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Oxct2aQ9JJN4 520 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rnf25Q9QZR0 456 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Atp1a4Q9WV27 1032 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Sept5Q9Z2Q6 369 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms