RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Rdh14Q9ERI6 334 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Caln1Q9JJG7 219 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Bcorl1A2AQH4 1781 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Xbp1O35426 267 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ift81O35594 676 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gnl1P36916 607 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pms2P54279 859 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Arl4cP61208 192 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rpl22P67984 128 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 FerP70451 823 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Capn3Q64691 821 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 SrlQ7TQ48 910 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Stxbp5Q8K400 1152 aaKnown RBP10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Olfr390Q8VEZ7 311 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rassf3Q99P51 232 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Dusp21Q9D9D8 189 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Sned1Q70E20 1403 aa10.28□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Mageb2A2AHM0 380 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Zc3h7aE9PWW6 970 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ppargc1aO70343 797 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nr3c1P06537 783 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mcpt4P21812 246 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Klf1P46099 358 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Sem1P60897 70 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 YwhagP61982 247 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Slc9b2Q5BKR2 547 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cyb5d1Q5NCY3 228 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 PterQ60866 349 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 MregQ6NVG5 214 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf507Q6ZPY5 941 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Wdtc1Q80ZK9 677 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ciapin1Q8WTY4 309 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Zfp623Q9CY99 499 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Satl1Q9D5N8 744 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Xpo7Q9EPK7 1087 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Bub1bQ9Z1S0 1052 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm16430A6X8J1 155 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Pde4aO89084 844 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Npas2P97460 816 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ptgs2Q05769 604 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Syce2Q505B8 171 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tdrd5Q5VCS6 1040 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Adgra1Q8C4G9 578 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Pomgnt1Q91X88 660 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rex1bdQ9CYZ6 169 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ddx56Q9D0R4 546 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Slxl1Q9D515 155 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 B020011L13RikA0A087WQI7 412 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ssxb9A2BI93 185 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Dpysl4O35098 572 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tnni3P48787 211 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 PhbP67778 272 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tbx3P70324 741 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rasgrf2P70392 1189 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Slc24a2Q14BI1 711 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Fam8a1Q3URQ4 399 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ppp4r3cQ3V0Y1 813 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Zfyve28Q6ZPK7 905 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cpsf7Q8BTV2 471 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Taf2Q8C176 1104 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 McmbpQ8R3C0 642 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Scyl1Q9EQC5 806 aaKnown RBP10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gabbr1Q9WV18 960 aa10.27□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Siah3B2RWG3 268 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 PtproE9Q612 1226 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ifnar2O35664 513 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 SfnO70456 248 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Elk3P41971 409 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Psmc1P62192 440 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cdh8P97291 799 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Serpina1eQ00898 413 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mark3Q03141 753 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nuak1Q641K5 658 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Vmn2r43Q80Z08 845 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 NfascQ810U3 1240 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tmco6Q8BQX5 494 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Azin2Q8BVM4 459 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Stoml1Q8CI66 399 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rpp40Q8R1F9 363 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Setd3Q91WC0 594 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cttnbp2nlQ99LJ0 638 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tmod4Q9JLH8 345 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Trpc3Q9QZC1 836 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ly75Q60767 1723 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ms4a14A0A087WSD2 1232 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Serpinh1P19324 417 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Drg1P32233 367 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kpnb1P70168 876 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Smad1P70340 465 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf746Q3U133 652 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ubn1Q4G0F8 1135 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cyp3a16Q64481 504 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 OcrlQ6NVF0 900 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 PygbQ8CI94 843 aaKnown RBP10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Arfip2Q8K221 341 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Pdik1lQ8QZR7 341 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tasp1Q8R1G1 420 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Pofut2Q8VHI3 429 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Trim60Q8VI40 466 aa10.26□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Epn3Q91W69 636 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms