RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Cdkn2aipQ8BI72 563 aa19.17■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Leng8Q8CBY3 785 aaKnown RBP19.17■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Prpf39Q8K2Z2 665 aa19.17■□□□□ 0.66
Scaf11-201ENSMUST00000047835 MyripQ8K3I4 856 aa19.17■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ccdc103Q9D9P2 237 aa19.17■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Gm1758F6VZZ1 202 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Kpna6O35345 536 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Impdh2P24547 514 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Sdr16c6Q05A13 316 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 NostrinQ6WKZ7 506 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 AagabQ8R2R3 316 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Tmprss4Q8VCA5 435 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Foxp3Q99JB6 429 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ddit4Q9D3F7 229 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ankfn1A0A140LIW7 1083 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 CrymO54983 313 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Aldh2P47738 519 aaKnown RBP19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Prkaa1Q5EG47 559 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Klra5Q60652 266 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ing3Q8VEK6 421 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Gm1141B9EJU1 475 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Hsd17b4P51660 735 aaKnown RBP19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ttc39dQ0VF76 604 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Pnpla5Q32LZ8 432 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Nudt18Q3U2V3 323 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Tmcc1Q69ZZ6 649 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 C3P01027 1663 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Zfp957Q3UT76 567 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Tas2r115Q7M719 310 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Gprc5aQ8BHL4 356 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Rpa1Q8VEE4 623 aaKnown RBP19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Fubp1Q91WJ8 651 aaKnown RBP19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Tbx20Q9ES03 445 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 NumbQ9QZS3 653 aa19.16■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Acot1O55137 419 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Lrrc6O88978 473 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Rasa2P58069 847 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Pomgnt2Q8BW41 605 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Dhx32Q8BZS9 744 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Champ1Q8K327 802 aaKnown RBP19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Uap1Q91YN5 522 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Pcna-ps2A0A140T8V5 261 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 AspgA0JNU3 564 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Zfy2P20662 777 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Pou2f3P31362 431 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ccdc138Q0VF22 680 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Dqx1Q924H9 718 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Pgm1Q9D0F9 562 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Atp5oQ9DB20 213 aaKnown RBP19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Shank2Q80Z38 1476 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 RcvrnP34057 202 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Ankmy2Q3TPE9 440 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Mapre1Q61166 268 aaKnown RBP19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 SugctQ7TNE1 436 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Mettl13Q91YR5 698 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Btbd18A0A0A6YY25 723 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Atp8b4A2ANX3 1194 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Aldh4a1Q8CHT0 562 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Tesk2Q8VCT9 570 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Rprd1aQ8VDS4 312 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Fbxo32Q9CPU7 355 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Sv2aQ9JIS5 742 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Rdh7O88451 316 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Prl2c2P04095 224 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Csde1Q91W50 798 aaKnown RBP19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Trpv6Q91WD2 767 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Fgfr1op2Q9CRA9 253 aa19.15■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Cbx2P30658 519 aa19.14■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Fam172aQ3TNH5 417 aa19.14■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Lpin2Q99PI5 893 aa19.14■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Cul3Q9JLV5 768 aa19.14■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Setd1bQ8CFT2 1985 aa19.14■□□□□ 0.66
Scaf11-201ENSMUST00000047835 Smim10l2aA0A0B4J1F8 78 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Hcn2O88703 863 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Morc4Q8BMD7 928 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 CgasQ8C6L5 507 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Kremen1Q99N43 473 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Zc3h13E9Q784 1729 aaKnown RBP19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Tlk2O55047 718 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Mmp10O55123 476 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Pla2g6P97819 807 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Tbc1d12Q6A039 696 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Wnk4Q80UE6 1222 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 GarsQ9CZD3 729 aaKnown RBP19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Ppp1r12aQ9DBR7 1029 aaKnown RBP19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 PtpraP18052 829 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Krt35Q497I4 455 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Elac2Q80Y81 831 aaKnown RBP19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Disc1Q811T9 852 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Brat1Q8C3R1 822 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 NgrnQ99KS2 293 aaKnown RBP19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Setd6Q9CWY3 473 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Tube1Q9D6T1 475 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 PapolbQ9WVP6 641 aa19.14■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Zfp472B0V2W5 534 aa19.13■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Scg3P47867 471 aa19.13■□□□□ 0.65
Scaf11-201ENSMUST00000047835 NogP97466 232 aa19.13■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Myo1dQ5SYD0 1006 aa19.13■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Moxd2Q7TT41 619 aa19.13■□□□□ 0.65
Scaf11-201ENSMUST00000047835 Pgrmc2Q80UU9 217 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms