RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Zbtb14Q08376 449 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 OtulinQ3UCV8 352 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Fam20cQ5MJS3 579 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Glg1Q61543 1175 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 DcstampQ7TNJ0 470 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Gramd1bQ80TI0 738 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Rhbdf2Q80WQ6 827 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Vmn1r64Q8R2B8 320 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 CmasQ99KK2 432 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Dbndd1Q9CZ00 160 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Tbx18Q9EPZ6 613 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 NesQ6P5H2 1864 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Herc6F2Z461 1003 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Nfil3O08750 462 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 DdcO88533 480 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Atp5bP56480 529 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ranbp9P69566 653 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Serpinb5P70124 375 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Gcnt1Q09324 428 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 HexdcQ3U4H6 486 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Snx27Q3UHD6 539 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Atp2a3Q64518 1038 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Clasp2Q8BRT1 1286 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Afg3l1Q920A7 789 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 HnrnpabQ99020 285 aaKnown RBP10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Mxra7Q9CZH7 178 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Fam227aQ9D3V8 625 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Prorsd1Q9D820 169 aa10.49□□□□□ -0.73
Copb1-201ENSMUST00000033012 Abca15E9PWH4 1668 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Farp1F8VPU2 1048 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Trim15G3UY57 292 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Marcksl1P28667 200 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Eps15P42567 897 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ogfod1Q3U0K8 545 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Tars2Q3UQ84 723 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Hmgb4Q6P8W9 181 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Kcnt1Q6ZPR4 1224 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ipo5Q8BKC5 1097 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 DlatQ8BMF4 642 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Calhm6Q8C9E8 313 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ufl1Q8CCJ3 793 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Myl6bQ8CI43 207 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Gbp7Q91Z40 638 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Atp5dQ9D3D9 168 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Iqcf1Q9D9K8 182 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Rassf7Q9DD19 359 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 PrccQ9EQC8 491 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Lima1Q9ERG0 753 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Slc13a2Q9ES88 586 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Dbn1Q9QXS6 706 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Myo5aQ99104 1853 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Nudt1P53368 156 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Dynll1P63168 89 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Lsg1Q3UM18 644 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Gm732Q3V0P9 516 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Exoc3l4Q6DIA2 721 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Dusp16Q6PCP3 660 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Pqlc1Q80XM9 271 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Bbs9Q811G0 885 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ppme1Q8BVQ5 386 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Pm20d1Q8C165 503 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 OgtQ8CGY8 1046 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Hdhd5Q91WM2 419 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Krt34Q9D646 392 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Nrxn3Q6P9K9 1571 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Prss40A6H6T1 365 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 DgkkE9Q7N4 1118 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Gm1661E9Q963 441 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ptar1E9QAB6 424 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 GfapP03995 430 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ido1P28776 407 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Pabpc1P29341 636 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Ripply1Q2WG77 201 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Hk3Q3TRM8 922 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Nt5dc3Q3UHB1 546 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Mdh1bQ5F204 500 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Islr2Q5RKR3 745 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Cdh7Q8BM92 785 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Slc38a7Q8BWH0 463 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 SucoQ8C341 1250 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Agbl2Q8CDK2 862 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 D630039A03RikQ8K0M7 236 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Brd8Q8R3B7 951 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Mtif2Q91YJ5 727 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 NarfQ9CYQ7 462 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Cmtm5Q9D6G9 156 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Mad2l2Q9D752 211 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Efhd2Q9D8Y0 240 aaKnown RBP10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 Fkbp9Q9Z247 570 aa10.48□□□□□ -0.73
Copb1-201ENSMUST00000033012 4931406B18RikA2RSL7 367 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Gm5795E9PZN8 263 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Lrrc32G3XA59 663 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Sult3a1O35403 293 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 AdprhP54923 362 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Rnf113a2Q14B01 337 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Sec31bQ3TZ89 1158 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Upf3bQ3ULL6 472 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Krt87Q6IMF0 495 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Rwdd4Q9CPR1 188 aa10.47□□□□□ -0.73
Copb1-201ENSMUST00000033012 Dppa5aQ9CQS7 118 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms