RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Cav1P49817 178 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Mnat1P51949 309 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Foxp2P58463 714 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Rasgrf2P70392 1189 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 PterQ60866 349 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Acot5Q6Q2Z6 421 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tas2r109Q7M707 316 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Ankzf1Q80UU1 748 aaKnown RBP18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Zfp454Q80Y34 536 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 MafaQ8CF90 359 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Hars2Q99KK9 505 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Taf1dQ9D4V4 322 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gm29133A0A1B0GT72 266 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Dpy19l4A2AJQ3 722 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gm5689F6Y2A6 97 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Nek2O35942 443 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Aoc3O70423 765 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Hoxc13P50207 328 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Shmt1P50431 478 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Eif3eP60229 445 aaKnown RBP18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Mark2Q05512 776 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tcf12Q61286 706 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Kcnk18Q6VV64 394 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Fam102aQ78T81 392 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 AmphQ7TQF7 686 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Frmd4aQ8BIE6 1020 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Trerf1Q8BXJ2 1205 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tor1aip2Q8BYU6 502 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Dhx32Q8BZS9 744 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 CenpuQ8C4M7 410 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Cog3Q8CI04 820 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Kat14Q8CID0 779 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tasp1Q8R1G1 420 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Nsmce1Q9D720 266 aa18.68■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Apol8A2VDH7 339 aaKnown RBP18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Slfn8B1ARD8 910 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Ccdc13D3YV10 709 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gja8P28236 440 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Clcn3P51791 818 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Smcr8Q3UMB5 935 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 MogsQ80UM7 834 aaKnown RBP18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Pgm5Q8BZF8 567 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Mms19Q9D071 1031 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Ddx56Q9D0R4 546 aaKnown RBP18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Limd1Q9QXD8 668 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Olfr456B2RT27 312 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gcnt4E9Q649 455 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Has3O08650 554 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Axin1O35625 863 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Srpk1O70551 648 aaKnown RBP18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 PrphP15331 475 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Sar1aP36536 198 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 SnrpfP62307 86 aaKnown RBP18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 PrkcbP68404 671 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Npas2P97460 816 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Znf112Q0VAW7 879 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Nt5dc3Q3UHB1 546 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Frmd5Q6P5H6 517 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Zfyve28Q6ZPK7 905 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Olfr458Q8VF80 313 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Olfr457Q8VGP5 313 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 DaglbQ91WC9 669 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Terb2Q9D494 218 aa18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Atp6v0a1Q9Z1G4 839 aaKnown RBP18.67■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gm3371F7CQW8 167 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Unc5cO08747 931 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Nrg3O35181 713 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Vav1P27870 845 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Elk3P41971 409 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tbc1d10aP58802 500 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Trcg1Q58Y74 825 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Vmn2r43Q80Z08 845 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Hsdl1Q8BTX9 330 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Pwp2Q8BU03 919 aaKnown RBP18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Nek8Q91ZR4 698 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tas1r1Q99PG6 842 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 1700129C05RikQ9CQ77 218 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Q9CYI0 393 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gins2Q9D600 185 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Slc8a1P70414 970 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Gm4952Q5FW57 296 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 CpQ61147 1061 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Ccdc40Q8BI79 1192 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Senp7Q8BUH8 1037 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Stau2Q8CJ67 570 aaKnown RBP18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 OlahQ8R197 265 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Me2Q99KE1 589 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 St13Q99L47 371 aaKnown RBP18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Tmem68Q9D850 329 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 PrccQ9EQC8 491 aaKnown RBP18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Ccdc170D3YXL0 722 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 PdgfraP26618 1089 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 NfiaQ02780 532 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Pak4Q8BTW9 593 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Sh2d5Q8JZW5 429 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Epn3Q91W69 636 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Ndfip2Q91ZP6 311 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Fam49bQ921M7 324 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 ParvaQ9EPC1 372 aa18.66■□□□□ 0.58
Ptpra-201ENSMUST00000028769 Serpinb3cA2RSF9 386 aa18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms