RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C YER188WP40103 239 aa5.03□□□□□ -1.6
VPS4YPR173C PCL7P40186 285 aa5.03□□□□□ -1.6
VPS4YPR173C YJL028WP47062 111 aa5.03□□□□□ -1.6
VPS4YPR173C THG1P53215 237 aaKnown RBP5.03□□□□□ -1.6
VPS4YPR173C UPS1Q05776 175 aa5.03□□□□□ -1.6
VPS4YPR173C YCR024C-BQ3E7Z8 88 aa5.03□□□□□ -1.6
VPS4YPR173C BRR2P32639 2163 aaKnown RBP5.03□□□□□ -1.6
VPS4YPR173C YPR170W-BP0C5R9 85 aa5.02□□□□□ -1.61
VPS4YPR173C YER190C-BP0CX94 160 aa5.02□□□□□ -1.61
VPS4YPR173C YEL077W-AP0CX95 160 aa5.02□□□□□ -1.61
VPS4YPR173C YGR296C-BP0CX96 160 aa5.02□□□□□ -1.61
VPS4YPR173C YPL283W-BP0CX97 160 aa5.02□□□□□ -1.61
VPS4YPR173C YPR204C-AP0CX98 160 aa5.02□□□□□ -1.61
VPS4YPR173C YCR006CP25350 157 aa5.02□□□□□ -1.61
VPS4YPR173C CWP1P28319 239 aa5.02□□□□□ -1.61
VPS4YPR173C QRI5P32344 111 aa5.02□□□□□ -1.61
VPS4YPR173C TEM1P38987 245 aa5.02□□□□□ -1.61
VPS4YPR173C GZF3P42944 551 aaKnown RBP5.02□□□□□ -1.61
VPS4YPR173C COX16P47081 118 aa5.02□□□□□ -1.61
VPS4YPR173C MIC27P50945 234 aa5.02□□□□□ -1.61
VPS4YPR173C RUB1Q03919 77 aa5.02□□□□□ -1.61
VPS4YPR173C YPL162CQ12042 273 aa5.02□□□□□ -1.61
VPS4YPR173C POC4Q12245 148 aaPredicted RBP5.02□□□□□ -1.61
VPS4YPR173C POM34Q12445 299 aa5.02□□□□□ -1.61
VPS4YPR173C VPS63O13549 108 aa5.01□□□□□ -1.61
VPS4YPR173C CDC26P14724 124 aa5.01□□□□□ -1.61
VPS4YPR173C ROX3P25046 220 aa5.01□□□□□ -1.61
VPS4YPR173C MTR2P34232 184 aaKnown RBP5.01□□□□□ -1.61
VPS4YPR173C PAM17P36147 197 aa5.01□□□□□ -1.61
VPS4YPR173C YIL163CP40448 117 aa5.01□□□□□ -1.61
VPS4YPR173C HAC1P41546 238 aa5.01□□□□□ -1.61
VPS4YPR173C YJR015WP47090 510 aa5.01□□□□□ -1.61
VPS4YPR173C SDC1Q03323 175 aa5.01□□□□□ -1.61
VPS4YPR173C YPR098CQ06089 161 aa5.01□□□□□ -1.61
VPS4YPR173C GEP5Q12393 293 aa5.01□□□□□ -1.61
VPS4YPR173C YGL258W-AQ3E740 77 aa5.01□□□□□ -1.61
VPS4YPR173C YMR31P19955 123 aa5□□□□□ -1.61
VPS4YPR173C PHD1P36093 366 aa5□□□□□ -1.61
VPS4YPR173C POP7P38291 140 aa5□□□□□ -1.61
VPS4YPR173C FYV4P38783 130 aaPredicted RBP5□□□□□ -1.61
VPS4YPR173C RPF1P38805 295 aaKnown RBP5□□□□□ -1.61
VPS4YPR173C OST1P41543 476 aaKnown RBP5□□□□□ -1.61
VPS4YPR173C DSK2P48510 373 aa5□□□□□ -1.61
VPS4YPR173C TAF4P50105 388 aa5□□□□□ -1.61
VPS4YPR173C YGL230CP53074 147 aa5□□□□□ -1.61
VPS4YPR173C YGL118CP53132 145 aa5□□□□□ -1.61
VPS4YPR173C WSC2P53832 503 aa5□□□□□ -1.61
VPS4YPR173C YDR391CQ04170 232 aa5□□□□□ -1.61
VPS4YPR173C NCE102Q12207 173 aaRIP-Chip data5□□□□□ -1.61not detected
VPS4YPR173C YIL046W-AQ3E7Z4 54 aa5□□□□□ -1.61
VPS4YPR173C YOR032W-AQ8TGS1 66 aa5□□□□□ -1.61
VPS4YPR173C POL2P21951 2222 aaKnown RBP5□□□□□ -1.61
VPS4YPR173C ADH2P00331 348 aaKnown RBP4.99□□□□□ -1.61
VPS4YPR173C COX1P00401 534 aa4.99□□□□□ -1.61
VPS4YPR173C COX2P00410 251 aa4.99□□□□□ -1.61
VPS4YPR173C CUP2P15315 225 aa4.99□□□□□ -1.61
VPS4YPR173C ERG8P24521 451 aa4.99□□□□□ -1.61
VPS4YPR173C MRP49P32388 137 aa4.99□□□□□ -1.61
VPS4YPR173C GSP1P32835 219 aaKnown RBP4.99□□□□□ -1.61
VPS4YPR173C GSP2P32836 220 aaKnown RBP4.99□□□□□ -1.61
VPS4YPR173C ICS2P38284 255 aa4.99□□□□□ -1.61
VPS4YPR173C SEC24P40482 926 aaKnown RBP4.99□□□□□ -1.61
VPS4YPR173C SAS2P40963 338 aa4.99□□□□□ -1.61
VPS4YPR173C MIC26P50087 233 aa4.99□□□□□ -1.61
VPS4YPR173C HSK3P69852 69 aa4.99□□□□□ -1.61
VPS4YPR173C DYN2Q02647 92 aa4.99□□□□□ -1.61
VPS4YPR173C LPP1Q04396 274 aa4.99□□□□□ -1.61
VPS4YPR173C ECM18Q04623 453 aa4.99□□□□□ -1.61
VPS4YPR173C CSM4Q08955 156 aa4.99□□□□□ -1.61
VPS4YPR173C YDL180WQ12301 547 aa4.99□□□□□ -1.61
VPS4YPR173C ACC1Q00955 2233 aaKnown RBP4.99□□□□□ -1.61
VPS4YPR173C SEC11P15367 167 aa4.98□□□□□ -1.61
VPS4YPR173C TOM40P23644 387 aaKnown RBP4.98□□□□□ -1.61
VPS4YPR173C RPS2P25443 254 aaKnown RBP4.98□□□□□ -1.61
VPS4YPR173C FPR2P32472 135 aa4.98□□□□□ -1.61
VPS4YPR173C RAD23P32628 398 aaKnown RBP4.98□□□□□ -1.61
VPS4YPR173C MSL1P40567 111 aaPredicted RBP4.98□□□□□ -1.61
VPS4YPR173C CIN5P40917 295 aa4.98□□□□□ -1.61
VPS4YPR173C EGT2P42835 1041 aa4.98□□□□□ -1.61
VPS4YPR173C TDA4P47153 279 aa4.98□□□□□ -1.61
VPS4YPR173C UBC13P52490 153 aa4.98□□□□□ -1.61
VPS4YPR173C COX18P53239 316 aa4.98□□□□□ -1.61
VPS4YPR173C MRPL19P53875 158 aa4.98□□□□□ -1.61
VPS4YPR173C ATP19P81451 68 aa4.98□□□□□ -1.61
VPS4YPR173C ATG21Q02887 496 aa4.98□□□□□ -1.61
VPS4YPR173C UPS3Q04006 179 aa4.98□□□□□ -1.61
VPS4YPR173C GIM5Q04493 163 aa4.98□□□□□ -1.61
VPS4YPR173C IZH3Q07959 543 aa4.98□□□□□ -1.61
VPS4YPR173C TAO3P40468 2376 aa4.98□□□□□ -1.61
VPS4YPR173C SEC16P48415 2195 aaKnown RBP4.98□□□□□ -1.61
VPS4YPR173C SAL1D6W196 494 aa4.97□□□□□ -1.61
VPS4YPR173C MBF1O14467 151 aaKnown RBP4.97□□□□□ -1.61
VPS4YPR173C SEC4P07560 215 aaKnown RBP4.97□□□□□ -1.61
VPS4YPR173C DDI2P0CH63 225 aa4.97□□□□□ -1.61
VPS4YPR173C DDI3P0CH64 225 aa4.97□□□□□ -1.61
VPS4YPR173C TIR1P10863 254 aa4.97□□□□□ -1.61
VPS4YPR173C ZRT1P32804 376 aa4.97□□□□□ -1.61
VPS4YPR173C YHR173CP38864 112 aa4.97□□□□□ -1.61
VPS4YPR173C LTP1P40347 161 aa4.97□□□□□ -1.61
VPS4YPR173C MIX14Q04341 121 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms