RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W HOP2P53187 214 aa0.68□□□□□ -2.3
RRI2YOL117W FMP49A0A023PZB3 126 aa0.68□□□□□ -2.3
RRI2YOL117W RIF1P29539 1916 aa0.67□□□□□ -2.3
RRI2YOL117W CSH1P38287 376 aa0.67□□□□□ -2.3
RRI2YOL117W XPT1P47165 209 aa0.67□□□□□ -2.3
RRI2YOL117W RAD6P06104 172 aa0.66□□□□□ -2.3
RRI2YOL117W TRR1P29509 319 aaKnown RBP0.66□□□□□ -2.3
RRI2YOL117W YEL028WP39989 153 aa0.66□□□□□ -2.3
RRI2YOL117W NQM1P53228 333 aaPredicted RBP0.66□□□□□ -2.3
RRI2YOL117W TIM13P53299 105 aa0.66□□□□□ -2.3
RRI2YOL117W YIP3P53633 176 aa0.66□□□□□ -2.3
RRI2YOL117W HHT1P61830 136 aa0.66□□□□□ -2.3
RRI2YOL117W NUF2P33895 451 aa0.66□□□□□ -2.3
RRI2YOL117W YGR269WP40326 108 aa0.65□□□□□ -2.31
RRI2YOL117W MOB1P40484 314 aa0.65□□□□□ -2.31
RRI2YOL117W GLC8P41818 229 aa0.65□□□□□ -2.31
RRI2YOL117W HSK3P69852 69 aa0.65□□□□□ -2.31
RRI2YOL117W TMA23Q03525 211 aa0.65□□□□□ -2.31
RRI2YOL117W YML079WQ03629 201 aa0.65□□□□□ -2.31
RRI2YOL117W SYM1Q06563 197 aa0.65□□□□□ -2.31
RRI2YOL117W SPS2P08459 502 aa0.64□□□□□ -2.31
RRI2YOL117W YOL013W-AP0C272 63 aaPredicted RBP0.64□□□□□ -2.31
RRI2YOL117W RAD51P25454 400 aa0.64□□□□□ -2.31
RRI2YOL117W GLR1P41921 483 aaKnown RBP0.64□□□□□ -2.31
RRI2YOL117W YDL241WQ07738 123 aa0.64□□□□□ -2.31
RRI2YOL117W INO4P13902 151 aa0.64□□□□□ -2.31
RRI2YOL117W YCR001WP25347 104 aa0.64□□□□□ -2.31
RRI2YOL117W SEC72P39742 193 aaKnown RBP0.64□□□□□ -2.31
RRI2YOL117W THI74Q04083 370 aa0.64□□□□□ -2.31
RRI2YOL117W YDL157CQ12082 118 aa0.64□□□□□ -2.31
RRI2YOL117W YLR050CQ12155 161 aaKnown RBP0.64□□□□□ -2.31
RRI2YOL117W PEX11Q12462 236 aa0.64□□□□□ -2.31
RRI2YOL117W KIN28P06242 306 aa0.63□□□□□ -2.31
RRI2YOL117W RPS25BP0C0T4 108 aaKnown RBP0.63□□□□□ -2.31
RRI2YOL117W PRE1P22141 198 aaKnown RBP0.63□□□□□ -2.31
RRI2YOL117W GIM3P53900 129 aa0.63□□□□□ -2.31
RRI2YOL117W RPS25AQ3E792 108 aaPredicted RBP0.63□□□□□ -2.31
RRI2YOL117W CDC39P25655 2108 aaKnown RBP0.62□□□□□ -2.31
RRI2YOL117W APS3P47064 194 aa0.62□□□□□ -2.31
RRI2YOL117W ATG10Q07879 167 aa0.62□□□□□ -2.31
RRI2YOL117W FCY1Q12178 158 aa0.62□□□□□ -2.31
RRI2YOL117W HHY1P39982 102 aa0.62□□□□□ -2.31
RRI2YOL117W YNL140CP53910 189 aa0.62□□□□□ -2.31
RRI2YOL117W LIP1Q03579 150 aa0.62□□□□□ -2.31
RRI2YOL117W YDR102CQ03864 110 aa0.62□□□□□ -2.31
RRI2YOL117W YPR114WQ06107 315 aa0.62□□□□□ -2.31
RRI2YOL117W TRM3Q07527 1436 aa0.61□□□□□ -2.31
RRI2YOL117W YPT31P38555 223 aaKnown RBP0.61□□□□□ -2.31
RRI2YOL117W EGD2P38879 174 aaKnown RBP0.61□□□□□ -2.31
RRI2YOL117W CMC4Q3E7A9 73 aa0.61□□□□□ -2.31
RRI2YOL117W RPL35AP0CX84 120 aaKnown RBP0.6□□□□□ -2.31
RRI2YOL117W RPL35BP0CX85 120 aaKnown RBP0.6□□□□□ -2.31
RRI2YOL117W SPT14P32363 452 aa0.6□□□□□ -2.31
RRI2YOL117W PLP1Q04004 230 aa0.6□□□□□ -2.31
RRI2YOL117W YBR027CP38220 110 aa0.6□□□□□ -2.31
RRI2YOL117W SRP14P38985 146 aa0.58□□□□□ -2.32
RRI2YOL117W CCC1P47818 322 aa0.58□□□□□ -2.32
RRI2YOL117W HRD1Q08109 551 aa0.58□□□□□ -2.32
RRI2YOL117W ATG8P38182 117 aaRIP-Chip data0.58□□□□□ -2.32not detected
RRI2YOL117W CMD1P06787 147 aaKnown RBP0.57□□□□□ -2.32
RRI2YOL117W GEP7P53171 287 aa0.57□□□□□ -2.32
RRI2YOL117W ATG38Q05789 226 aaKnown RBP0.57□□□□□ -2.32
RRI2YOL117W TAF2P23255 1407 aa0.57□□□□□ -2.32
RRI2YOL117W CIN5P40917 295 aa0.56□□□□□ -2.32
RRI2YOL117W UIP4Q08926 304 aa0.56□□□□□ -2.32
RRI2YOL117W PTC1P35182 281 aa0.56□□□□□ -2.32
RRI2YOL117W YEL014CP39999 101 aa0.56□□□□□ -2.32
RRI2YOL117W YGL101WP53144 215 aa0.56□□□□□ -2.32
RRI2YOL117W RIB3Q99258 208 aa0.56□□□□□ -2.32
RRI2YOL117W MRS4P23500 304 aa0.55□□□□□ -2.32
RRI2YOL117W HSP150P32478 413 aa0.55□□□□□ -2.32
RRI2YOL117W SRP102P36057 244 aaPredicted RBP0.55□□□□□ -2.32
RRI2YOL117W ORM1P53224 222 aa0.55□□□□□ -2.32
RRI2YOL117W YNR064CP53750 290 aa0.55□□□□□ -2.32
RRI2YOL117W VAM10Q08474 114 aa0.54□□□□□ -2.32
RRI2YOL117W YHR213W-BQ8TGK1 99 aa0.54□□□□□ -2.32
RRI2YOL117W ATP5P09457 212 aa0.54□□□□□ -2.32
RRI2YOL117W ROM2P51862 1356 aaKnown RBP0.53□□□□□ -2.32
RRI2YOL117W UBI4P0CG63 381 aaKnown RBP0.53□□□□□ -2.32
RRI2YOL117W YER121WP40076 114 aa0.53□□□□□ -2.32
RRI2YOL117W TMA20P89886 181 aaPredicted RBP0.53□□□□□ -2.32
RRI2YOL117W GIM5Q04493 163 aa0.53□□□□□ -2.32
RRI2YOL117W RDI1Q12434 202 aa0.53□□□□□ -2.32
RRI2YOL117W HTD2P38790 280 aaKnown RBP0.52□□□□□ -2.33
RRI2YOL117W SEN15Q04675 128 aa0.52□□□□□ -2.33
RRI2YOL117W SRP21P32342 167 aa0.51□□□□□ -2.33
RRI2YOL117W YNL122CP53921 115 aaPredicted RBP0.51□□□□□ -2.33
RRI2YOL117W NMA1Q06178 401 aaKnown RBP0.51□□□□□ -2.33
RRI2YOL117W PRM3Q08931 133 aa0.51□□□□□ -2.33
RRI2YOL117W ADE6P38972 1358 aaKnown RBP0.5□□□□□ -2.33
RRI2YOL117W IPT1P38954 527 aa0.5□□□□□ -2.33
RRI2YOL117W YLR046CQ12253 270 aa0.5□□□□□ -2.33
RRI2YOL117W UBC6P33296 250 aaPredicted RBP0.5□□□□□ -2.33
RRI2YOL117W LSM3P57743 89 aaKnown RBP0.5□□□□□ -2.33
RRI2YOL117W IRC19Q07843 230 aa0.5□□□□□ -2.33
RRI2YOL117W ECM31P38122 312 aa0.49□□□□□ -2.33
RRI2YOL117W FES1P38260 290 aa0.49□□□□□ -2.33
RRI2YOL117W DLS1P40366 167 aa0.49□□□□□ -2.33
RRI2YOL117W FIP1P45976 327 aa0.49□□□□□ -2.33
RRI2YOL117W DIE2P50076 525 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 177.9 ms