RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	ALG13	P53178	202 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	CWC27	Q02770	301 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	ARL3	Q02804	198 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	YPL080C	Q02826	108 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	RUB1	Q03919	77 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CSL4	YNL232W	YLR050C	Q12155	161 aa	Known RBP	4.24	□□□□□ -1.73
CSL4	YNL232W	YLR361C-A	Q3E795	98 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	YER175W-A	Q8TGU4	54 aa		4.24	□□□□□ -1.73
CSL4	YNL232W	COQ3	P27680	312 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	ACB1	P31787	87 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	RPL32	P38061	130 aa	Known RBP	4.23	□□□□□ -1.73
CSL4	YNL232W	MBB1	P39534	108 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	YJL218W	P40892	196 aa	Known RBP	4.23	□□□□□ -1.73
CSL4	YNL232W	AIM24	P47127	394 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	DIE2	P50076	525 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	YOR292C	Q08743	309 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	YCL001W-B	Q96VH2	84 aa		4.23	□□□□□ -1.73
CSL4	YNL232W	YOR304C-A	O14468	76 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	RPL28	P02406	149 aa	Known RBP	4.22	□□□□□ -1.73
CSL4	YNL232W	CHO1	P08456	276 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	CPT1	P17898	393 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	SIM1	P40472	476 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	YPI1	P43587	155 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	YJR011C	P47086	261 aa	Predicted RBP	4.22	□□□□□ -1.73
CSL4	YNL232W	GPI14	P47088	403 aa	Known RBP	4.22	□□□□□ -1.73
CSL4	YNL232W	BXI1	P48558	297 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	MMS2	P53152	137 aa		4.22	□□□□□ -1.73
CSL4	YNL232W	SAL1	D6W196	494 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	RPL12A	P0CX53	165 aa	Known RBP	4.21	□□□□□ -1.74
CSL4	YNL232W	RPL12B	P0CX54	165 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	ATR1	P13090	542 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	PRE7	P23724	241 aa	Known RBP	4.21	□□□□□ -1.74
CSL4	YNL232W	GOS1	P38736	223 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	HNT1	Q04344	158 aa	Known RBP	4.21	□□□□□ -1.74
CSL4	YNL232W	MHR1	Q06630	226 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	POM33	Q12164	279 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	ATP16	Q12165	160 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	RDI1	Q12434	202 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	YLR099W-A	Q3E798	87 aa		4.21	□□□□□ -1.74
CSL4	YNL232W	IFM1	P25038	676 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	HOM6	P31116	359 aa	Known RBP	4.2	□□□□□ -1.74
CSL4	YNL232W	GSP1	P32835	219 aa	Known RBP	4.2	□□□□□ -1.74
CSL4	YNL232W	GSP2	P32836	220 aa	Known RBP	4.2	□□□□□ -1.74
CSL4	YNL232W	YBR137W	P38276	179 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	YPT31	P38555	223 aa	Known RBP	4.2	□□□□□ -1.74
CSL4	YNL232W	LST8	P41318	303 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	DOC1	P53068	250 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	DID2	P69771	204 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	AIM34	Q03673	198 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	PKR1	Q03880	122 aa	Known RBP	4.2	□□□□□ -1.74
CSL4	YNL232W	SDH7	Q04401	133 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	ATG39	Q06159	398 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	LDS2	Q08218	356 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	YPR108W-A	Q3E7B3	70 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	YLR365W	Q7LIF2	110 aa		4.2	□□□□□ -1.74
CSL4	YNL232W	NOP1	P15646	327 aa	Known RBP	4.19	□□□□□ -1.74
CSL4	YNL232W	SEC22	P22214	214 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	AHC2	P25649	128 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	IRC18	P47056	224 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	TDA4	P47153	279 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	RBL2	P48606	106 aa	Known RBP	4.19	□□□□□ -1.74
CSL4	YNL232W	YGR017W	P53210	297 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	ERV29	P53337	310 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	SWT21	P53873	357 aa	Predicted RBP	4.19	□□□□□ -1.74
CSL4	YNL232W	MAK3	Q03503	176 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	TSA2	Q04120	196 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	VBA1	Q04301	562 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	YGK3	Q12222	375 aa	Predicted RBP	4.19	□□□□□ -1.74
CSL4	YNL232W	BOL1	Q3E793	110 aa		4.19	□□□□□ -1.74
CSL4	YNL232W	PHD1	P36093	366 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	MST28	P39552	234 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	SAS2	P40963	338 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	ILM1	P47155	203 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	MST27	P53176	234 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	HAL1	Q01766	294 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	PLP1	Q04004	230 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	DPP1	Q05521	289 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	ARC18	Q05933	178 aa	Known RBP	4.18	□□□□□ -1.74
CSL4	YNL232W	ZEO1	Q08245	113 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	YOR283W	Q12040	230 aa	Known RBP	4.18	□□□□□ -1.74
CSL4	YNL232W	ODC2	Q99297	307 aa		4.18	□□□□□ -1.74
CSL4	YNL232W	SOD1	P00445	154 aa	Known RBP	4.17	□□□□□ -1.74
CSL4	YNL232W	TPI1	P00942	248 aa	Known RBP	4.17	□□□□□ -1.74
CSL4	YNL232W	LAC1	P28496	418 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	IPI1	P38803	334 aa	Predicted RBP	4.17	□□□□□ -1.74
CSL4	YNL232W	NVJ1	P38881	321 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	YIL060W	P40519	144 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	RPR2	P40571	144 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	SYS1	P41544	203 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	SAE3	P89114	91 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	UBC7	Q02159	165 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	TIR4	Q12218	487 aa	Predicted RBP	4.17	□□□□□ -1.74
CSL4	YNL232W	YCT1	Q12235	531 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	ATP14	Q12349	124 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	SLO1	Q3E784	85 aa		4.17	□□□□□ -1.74
CSL4	YNL232W	CYC3	P06182	269 aa		4.16	□□□□□ -1.74
CSL4	YNL232W	NTF2	P33331	125 aa	Known RBP	4.16	□□□□□ -1.74
CSL4	YNL232W	YHR138C	P38841	114 aa	Predicted RBP	4.16	□□□□□ -1.74
CSL4	YNL232W	YAR068W	P39564	161 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms