RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W HAP2P06774 265 aa3.41□□□□□ -1.86
VPS36YLR417W ADE1P27616 306 aa3.41□□□□□ -1.86
VPS36YLR417W EMP24P32803 203 aaKnown RBP3.41□□□□□ -1.86
VPS36YLR417W DOG2P38773 246 aa3.41□□□□□ -1.86
VPS36YLR417W DOG1P38774 246 aa3.41□□□□□ -1.86
VPS36YLR417W YHR125WP38831 101 aa3.41□□□□□ -1.86
VPS36YLR417W GCV3P39726 170 aaPredicted RBP3.41□□□□□ -1.86
VPS36YLR417W PAC10P48363 199 aa3.41□□□□□ -1.86
VPS36YLR417W DIA1P54005 336 aa3.41□□□□□ -1.86
VPS36YLR417W YDC1Q02896 317 aa3.41□□□□□ -1.86
VPS36YLR417W GIM5Q04493 163 aa3.41□□□□□ -1.86
VPS36YLR417W SWC7Q06707 132 aa3.41□□□□□ -1.86
VPS36YLR417W PUT1P09368 476 aa3.4□□□□□ -1.87
VPS36YLR417W FCY2P17064 533 aa3.4□□□□□ -1.87
VPS36YLR417W MIG1P27705 504 aa3.4□□□□□ -1.87
VPS36YLR417W MRP17P28778 131 aa3.4□□□□□ -1.87
VPS36YLR417W SPS18P32572 300 aa3.4□□□□□ -1.87
VPS36YLR417W YPT31P38555 223 aaKnown RBP3.4□□□□□ -1.87
VPS36YLR417W EDC3P39998 551 aaKnown RBP3.4□□□□□ -1.87
VPS36YLR417W YPR127WQ06494 345 aa3.4□□□□□ -1.87
VPS36YLR417W YFR010W-AP0C5N0 62 aa3.39□□□□□ -1.87
VPS36YLR417W SEC59P20048 519 aa3.39□□□□□ -1.87
VPS36YLR417W SSS1P35179 80 aa3.39□□□□□ -1.87
VPS36YLR417W YAR068WP39564 161 aa3.39□□□□□ -1.87
VPS36YLR417W YER188WP40103 239 aa3.39□□□□□ -1.87
VPS36YLR417W CIN5P40917 295 aa3.39□□□□□ -1.87
VPS36YLR417W ATG39Q06159 398 aa3.39□□□□□ -1.87
VPS36YLR417W UBR2Q07963 1872 aa3.39□□□□□ -1.87
VPS36YLR417W GRE1Q08969 168 aa3.39□□□□□ -1.87
VPS36YLR417W VMA9Q3E7B6 73 aa3.39□□□□□ -1.87
VPS36YLR417W YPR096CO13587 100 aa3.39□□□□□ -1.87
VPS36YLR417W PET9P18239 318 aaKnown RBP3.39□□□□□ -1.87
VPS36YLR417W SFK1P35735 353 aa3.39□□□□□ -1.87
VPS36YLR417W YKR032WP36127 104 aa3.39□□□□□ -1.87
VPS36YLR417W MRPL28P36527 147 aa3.39□□□□□ -1.87
VPS36YLR417W ATG8P38182 117 aaRIP-Chip data3.39□□□□□ -1.87not detected
VPS36YLR417W ECM33P38248 429 aaKnown RBP3.39□□□□□ -1.87
VPS36YLR417W SEC72P39742 193 aaKnown RBP3.39□□□□□ -1.87
VPS36YLR417W IRC22P40006 225 aa3.39□□□□□ -1.87
VPS36YLR417W YJL144WP47009 104 aa3.39□□□□□ -1.87
VPS36YLR417W YNL140CP53910 189 aa3.39□□□□□ -1.87
VPS36YLR417W YMR315WQ04869 349 aaKnown RBP3.39□□□□□ -1.87
VPS36YLR417W NOC4Q06512 552 aaPredicted RBP3.39□□□□□ -1.87
VPS36YLR417W SEC4P07560 215 aaKnown RBP3.38□□□□□ -1.87
VPS36YLR417W SCM4P32564 187 aa3.38□□□□□ -1.87
VPS36YLR417W TCA17P32613 152 aa3.38□□□□□ -1.87
VPS36YLR417W SDH4P37298 181 aa3.38□□□□□ -1.87
VPS36YLR417W HTD2P38790 280 aaKnown RBP3.38□□□□□ -1.87
VPS36YLR417W NSE4P43124 402 aa3.38□□□□□ -1.87
VPS36YLR417W CAB4P53332 305 aa3.38□□□□□ -1.87
VPS36YLR417W PAU12P53343 120 aa3.38□□□□□ -1.87
VPS36YLR417W FIT1Q04433 528 aa3.38□□□□□ -1.87
VPS36YLR417W FYV7Q12247 151 aa3.38□□□□□ -1.87
VPS36YLR417W MHT1Q12525 324 aa3.38□□□□□ -1.87
VPS36YLR417W YLR099W-AQ3E798 87 aa3.38□□□□□ -1.87
VPS36YLR417W HKR1P41809 1802 aa3.38□□□□□ -1.87
VPS36YLR417W SEC17P32602 292 aa3.37□□□□□ -1.87
VPS36YLR417W PAU24P38155 120 aa3.37□□□□□ -1.87
VPS36YLR417W AGE2P40529 298 aa3.37□□□□□ -1.87
VPS36YLR417W EMC5P40540 141 aa3.37□□□□□ -1.87
VPS36YLR417W SSU72P53538 206 aaPredicted RBP3.37□□□□□ -1.87
VPS36YLR417W CWC27Q02770 301 aa3.37□□□□□ -1.87
VPS36YLR417W MET31Q03081 177 aa3.37□□□□□ -1.87
VPS36YLR417W CUE4Q04201 117 aaPredicted RBP3.37□□□□□ -1.87
VPS36YLR417W LPP1Q04396 274 aa3.37□□□□□ -1.87
VPS36YLR417W KEI1Q06346 221 aa3.37□□□□□ -1.87
VPS36YLR417W ATG41Q12048 136 aa3.37□□□□□ -1.87
VPS36YLR417W YDL085C-AQ3E7B7 68 aaKnown RBP3.37□□□□□ -1.87
VPS36YLR417W COX9P07255 59 aa3.36□□□□□ -1.87
VPS36YLR417W ATP5P09457 212 aa3.36□□□□□ -1.87
VPS36YLR417W RPL13BP40212 199 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W PAU15P40585 124 aa3.36□□□□□ -1.87
VPS36YLR417W YGL101WP53144 215 aa3.36□□□□□ -1.87
VPS36YLR417W MMS2P53152 137 aa3.36□□□□□ -1.87
VPS36YLR417W SCP1Q08873 200 aa3.36□□□□□ -1.87
VPS36YLR417W YOR385WQ08909 290 aa3.36□□□□□ -1.87
VPS36YLR417W RPL13AQ12690 199 aaPredicted RBP3.36□□□□□ -1.87
VPS36YLR417W RPL26AP05743 127 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W UBI4P0CG63 381 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W RPL40AP0CH08 128 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W RPL40BP0CH09 128 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W FUN14P18411 198 aa3.36□□□□□ -1.87
VPS36YLR417W PAU2P32612 120 aa3.36□□□□□ -1.87
VPS36YLR417W CLB6P32943 380 aa3.36□□□□□ -1.87
VPS36YLR417W RPS20P38701 121 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W SPC25P40014 221 aa3.36□□□□□ -1.87
VPS36YLR417W ICE2P40499 491 aa3.36□□□□□ -1.87
VPS36YLR417W GLC8P41818 229 aa3.36□□□□□ -1.87
VPS36YLR417W DAN1P47178 298 aa3.36□□□□□ -1.87
VPS36YLR417W RPL26BP53221 127 aaKnown RBP3.36□□□□□ -1.87
VPS36YLR417W PET191Q02772 108 aa3.36□□□□□ -1.87
VPS36YLR417W RNH202Q05635 350 aa3.36□□□□□ -1.87
VPS36YLR417W FCF2Q12035 217 aaPredicted RBP3.36□□□□□ -1.87
VPS36YLR417W YPR170W-BP0C5R9 85 aa3.35□□□□□ -1.87
VPS36YLR417W RPB3P16370 318 aaKnown RBP3.35□□□□□ -1.87
VPS36YLR417W TRS20P38334 175 aa3.35□□□□□ -1.87
VPS36YLR417W VMA21P41806 77 aa3.35□□□□□ -1.87
VPS36YLR417W SOL1P50278 321 aa3.35□□□□□ -1.87
VPS36YLR417W APJ1P53940 528 aa3.35□□□□□ -1.87
VPS36YLR417W SAE3P89114 91 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms