RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C YMR082CQ04276 118 aa3.84□□□□□ -1.79
BUD28YLR062C SCW10Q04951 389 aa3.84□□□□□ -1.79
BUD28YLR062C TRI1Q05024 226 aa3.84□□□□□ -1.79
BUD28YLR062C ERP1Q05359 219 aaKnown RBP3.84□□□□□ -1.79
BUD28YLR062C YLR146W-AQ2V2P1 62 aa3.84□□□□□ -1.79
BUD28YLR062C RPS25AQ3E792 108 aaPredicted RBP3.84□□□□□ -1.79
BUD28YLR062C CDC7P06243 507 aa3.83□□□□□ -1.8
BUD28YLR062C YHR213WP0CI67 198 aa3.83□□□□□ -1.8
BUD28YLR062C CKS1P20486 150 aaKnown RBP3.83□□□□□ -1.8
BUD28YLR062C NPL6P32832 435 aa3.83□□□□□ -1.8
BUD28YLR062C GLE2P40066 365 aa3.83□□□□□ -1.8
BUD28YLR062C YGR269WP40326 108 aa3.83□□□□□ -1.8
BUD28YLR062C SIM1P40472 476 aa3.83□□□□□ -1.8
BUD28YLR062C YJR015WP47090 510 aa3.83□□□□□ -1.8
BUD28YLR062C HAM1P47119 197 aaKnown RBP3.83□□□□□ -1.8
BUD28YLR062C TDA4P47153 279 aa3.83□□□□□ -1.8
BUD28YLR062C PNC1P53184 216 aaKnown RBP3.83□□□□□ -1.8
BUD28YLR062C LST7P53237 242 aa3.83□□□□□ -1.8
BUD28YLR062C OCA2P53949 197 aa3.83□□□□□ -1.8
BUD28YLR062C RRG8Q06109 277 aa3.83□□□□□ -1.8
BUD28YLR062C POM34Q12445 299 aa3.83□□□□□ -1.8
BUD28YLR062C YHR213W-AQ8TGT4 77 aa3.83□□□□□ -1.8
BUD28YLR062C YMR316C-AI2HB70 103 aa3.82□□□□□ -1.8
BUD28YLR062C ACB1P31787 87 aa3.82□□□□□ -1.8
BUD28YLR062C SWM2P40342 146 aa3.82□□□□□ -1.8
BUD28YLR062C CAF16P43569 289 aa3.82□□□□□ -1.8
BUD28YLR062C IMP2P46972 177 aa3.82□□□□□ -1.8
BUD28YLR062C YJR111CP47148 283 aaKnown RBP3.82□□□□□ -1.8
BUD28YLR062C MIC26P50087 233 aa3.82□□□□□ -1.8
BUD28YLR062C ALG13P53178 202 aa3.82□□□□□ -1.8
BUD28YLR062C HST4P53688 370 aa3.82□□□□□ -1.8
BUD28YLR062C FYV6P53913 173 aa3.82□□□□□ -1.8
BUD28YLR062C LDS2Q08218 356 aa3.82□□□□□ -1.8
BUD28YLR062C PRR2Q12310 699 aa3.82□□□□□ -1.8
BUD28YLR062C SCM3Q12334 223 aa3.82□□□□□ -1.8
BUD28YLR062C AGC1Q12482 902 aa3.82□□□□□ -1.8
BUD28YLR062C YBR182C-AQ8TGU6 64 aa3.82□□□□□ -1.8
BUD28YLR062C YDR157WA0A023PZE8 133 aa3.81□□□□□ -1.8
BUD28YLR062C SIP1P32578 815 aa3.81□□□□□ -1.8
BUD28YLR062C UPS2P35200 230 aa3.81□□□□□ -1.8
BUD28YLR062C SRL3P36167 246 aa3.81□□□□□ -1.8
BUD28YLR062C NRG2P38082 220 aa3.81□□□□□ -1.8
BUD28YLR062C SNF11P38956 169 aa3.81□□□□□ -1.8
BUD28YLR062C MIC27P50945 234 aa3.81□□□□□ -1.8
BUD28YLR062C ORM1P53224 222 aa3.81□□□□□ -1.8
BUD28YLR062C BOR1P53838 576 aa3.81□□□□□ -1.8
BUD28YLR062C DID2P69771 204 aa3.81□□□□□ -1.8
BUD28YLR062C SDH7Q04401 133 aa3.81□□□□□ -1.8
BUD28YLR062C ARR3Q06598 404 aa3.81□□□□□ -1.8
BUD28YLR062C GEP3Q08622 556 aa3.81□□□□□ -1.8
BUD28YLR062C SAR1P20606 190 aaKnown RBP3.8□□□□□ -1.8
BUD28YLR062C SHB17P36136 271 aaKnown RBP3.8□□□□□ -1.8
BUD28YLR062C YEA4P40004 342 aa3.8□□□□□ -1.8
BUD28YLR062C GPI2P46961 280 aa3.8□□□□□ -1.8
BUD28YLR062C ATG27P46989 271 aa3.8□□□□□ -1.8
BUD28YLR062C YGR025WP53216 100 aa3.8□□□□□ -1.8
BUD28YLR062C ODC1Q03028 310 aa3.8□□□□□ -1.8
BUD28YLR062C SHH3Q04487 196 aa3.8□□□□□ -1.8
BUD28YLR062C AYT1Q12226 474 aa3.8□□□□□ -1.8
BUD28YLR062C YOR011W-AQ3E807 68 aa3.8□□□□□ -1.8
BUD28YLR062C CMC1P36064 111 aa3.79□□□□□ -1.8
BUD28YLR062C SFT2P38166 215 aa3.79□□□□□ -1.8
BUD28YLR062C LCB3P47013 409 aa3.79□□□□□ -1.8
BUD28YLR062C PHO23P50947 330 aa3.79□□□□□ -1.8
BUD28YLR062C YGL117WP53133 265 aa3.79□□□□□ -1.8
BUD28YLR062C COX12Q01519 83 aa3.79□□□□□ -1.8
BUD28YLR062C YLR179CQ06252 201 aaKnown RBP3.79□□□□□ -1.8
BUD28YLR062C BER1Q06688 274 aaKnown RBP3.79□□□□□ -1.8
BUD28YLR062C IZH3Q07959 543 aa3.79□□□□□ -1.8
BUD28YLR062C DFR1P07807 211 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
BUD28YLR062C YBL059WP34224 193 aa3.78□□□□□ -1.8
BUD28YLR062C LSM2P38203 95 aaKnown RBP3.78□□□□□ -1.8
BUD28YLR062C PET100P38958 111 aa3.78□□□□□ -1.8
BUD28YLR062C SAS2P40963 338 aa3.78□□□□□ -1.8
BUD28YLR062C AIM24P47127 394 aa3.78□□□□□ -1.8
BUD28YLR062C YIP3P53633 176 aa3.78□□□□□ -1.8
BUD28YLR062C UBC7Q02159 165 aa3.78□□□□□ -1.8
BUD28YLR062C CTR3Q06686 241 aa3.78□□□□□ -1.8
BUD28YLR062C RDS3Q06835 107 aaPredicted RBP3.78□□□□□ -1.8
BUD28YLR062C YDL242WQ07746 117 aa3.78□□□□□ -1.8
BUD28YLR062C PRM7Q12459 698 aa3.78□□□□□ -1.8
BUD28YLR062C PCL2P25693 308 aa3.77□□□□□ -1.81
BUD28YLR062C AHT1P29589 182 aa3.77□□□□□ -1.81
BUD28YLR062C EMP24P32803 203 aaKnown RBP3.77□□□□□ -1.81
BUD28YLR062C TAD2P47058 250 aa3.77□□□□□ -1.81
BUD28YLR062C YNR071CP53757 342 aa3.77□□□□□ -1.81
BUD28YLR062C YMR007WQ03675 126 aa3.77□□□□□ -1.81
BUD28YLR062C YMR244WQ04018 355 aa3.77□□□□□ -1.81
BUD28YLR062C ANT1Q06497 328 aa3.77□□□□□ -1.81
BUD28YLR062C YOL160WQ08321 113 aa3.77□□□□□ -1.81
BUD28YLR062C YGL194C-AQ2V2P6 80 aa3.77□□□□□ -1.81
BUD28YLR062C YNL146C-AQ3E7Z1 64 aa3.77□□□□□ -1.81
BUD28YLR062C Q0142Q9ZZW4 58 aa3.77□□□□□ -1.81
BUD28YLR062C YLR415CO13578 112 aa3.76□□□□□ -1.81
BUD28YLR062C DDI2P0CH63 225 aa3.76□□□□□ -1.81
BUD28YLR062C DDI3P0CH64 225 aa3.76□□□□□ -1.81
BUD28YLR062C GCN3P14741 305 aa3.76□□□□□ -1.81
BUD28YLR062C QCR9P22289 66 aa3.76□□□□□ -1.81
BUD28YLR062C CDC50P25656 391 aa3.76□□□□□ -1.81
BUD28YLR062C TIR2P33890 251 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms