RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W NIP7Q08962 181 aaKnown RBP3□□□□□ -1.93
NUP85YJR042W VPS68Q12016 184 aa3□□□□□ -1.93
NUP85YJR042W PSF1Q12488 208 aa3□□□□□ -1.93
NUP85YJR042W YOL162WP0CF19 215 aa2.99□□□□□ -1.93
NUP85YJR042W STP22P25604 385 aa2.99□□□□□ -1.93
NUP85YJR042W OMA1P36163 345 aa2.99□□□□□ -1.93
NUP85YJR042W YNL200CP40165 246 aaKnown RBP2.99□□□□□ -1.93
NUP85YJR042W YIL152WP40455 235 aa2.99□□□□□ -1.93
NUP85YJR042W YIL012WP40551 113 aa2.99□□□□□ -1.93
NUP85YJR042W CRH1P53301 507 aa2.99□□□□□ -1.93
NUP85YJR042W COF1Q03048 143 aaKnown RBP2.99□□□□□ -1.93
NUP85YJR042W RAV2Q03956 351 aa2.99□□□□□ -1.93
NUP85YJR042W HIS3P06633 220 aa2.99□□□□□ -1.93
NUP85YJR042W COX9P07255 59 aa2.99□□□□□ -1.93
NUP85YJR042W IMP1P28627 190 aa2.99□□□□□ -1.93
NUP85YJR042W YRA2P36036 203 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
NUP85YJR042W MSA2P36157 363 aa2.99□□□□□ -1.93
NUP85YJR042W YND1P40009 630 aa2.99□□□□□ -1.93
NUP85YJR042W SKI6P46948 246 aaPredicted RBP2.99□□□□□ -1.93
NUP85YJR042W TTI2P47168 421 aa2.99□□□□□ -1.93
NUP85YJR042W FEX2Q08991 375 aa2.99□□□□□ -1.93
NUP85YJR042W ATG41Q12048 136 aa2.99□□□□□ -1.93
NUP85YJR042W TDA8Q6B2U8 126 aa2.99□□□□□ -1.93
NUP85YJR042W YHR213W-AQ8TGT4 77 aa2.99□□□□□ -1.93
NUP85YJR042W HHF1P02309 103 aaKnown RBP2.98□□□□□ -1.93
NUP85YJR042W FPR1P20081 114 aaKnown RBP2.98□□□□□ -1.93
NUP85YJR042W RPB5P20434 215 aa2.98□□□□□ -1.93
NUP85YJR042W CKS1P20486 150 aaKnown RBP2.98□□□□□ -1.93
NUP85YJR042W MAG1P22134 296 aaKnown RBP2.98□□□□□ -1.93
NUP85YJR042W LDS1P31379 325 aa2.98□□□□□ -1.93
NUP85YJR042W PAU24P38155 120 aa2.98□□□□□ -1.93
NUP85YJR042W YPL073CP40323 161 aa2.98□□□□□ -1.93
NUP85YJR042W LPP1Q04396 274 aa2.98□□□□□ -1.93
NUP85YJR042W YDL211CQ12121 372 aa2.98□□□□□ -1.93
NUP85YJR042W SPC3Q12133 184 aa2.98□□□□□ -1.93
NUP85YJR042W FYV7Q12247 151 aa2.98□□□□□ -1.93
NUP85YJR042W ATP14Q12349 124 aa2.98□□□□□ -1.93
NUP85YJR042W SLO1Q3E784 85 aa2.98□□□□□ -1.93
NUP85YJR042W TAD3Q9URQ3 322 aa2.98□□□□□ -1.93
NUP85YJR042W PAU2P32612 120 aa2.97□□□□□ -1.93
NUP85YJR042W YKR070WP36151 352 aaKnown RBP2.97□□□□□ -1.93
NUP85YJR042W HTD2P38790 280 aaKnown RBP2.97□□□□□ -1.93
NUP85YJR042W RFC2P40348 353 aa2.97□□□□□ -1.93
NUP85YJR042W PGU1P47180 361 aa2.97□□□□□ -1.93
NUP85YJR042W RPS12P48589 143 aaKnown RBP2.97□□□□□ -1.93
NUP85YJR042W VPS71Q03433 280 aa2.97□□□□□ -1.93
NUP85YJR042W YDR391CQ04170 232 aa2.97□□□□□ -1.93
NUP85YJR042W ATG10Q07879 167 aa2.97□□□□□ -1.93
NUP85YJR042W YPL162CQ12042 273 aa2.97□□□□□ -1.93
NUP85YJR042W YER078W-AQ3E7A2 54 aa2.97□□□□□ -1.93
NUP85YJR042W SUI1P32911 108 aaKnown RBP2.97□□□□□ -1.93
NUP85YJR042W YOR062CP36025 268 aa2.97□□□□□ -1.93
NUP85YJR042W PTH1P38876 190 aaKnown RBP2.97□□□□□ -1.93
NUP85YJR042W YFR054CP43622 192 aa2.97□□□□□ -1.93
NUP85YJR042W YJL028WP47062 111 aa2.97□□□□□ -1.93
NUP85YJR042W YGL088WP53151 121 aa2.97□□□□□ -1.93
NUP85YJR042W BOR1P53838 576 aa2.97□□□□□ -1.93
NUP85YJR042W YDR415CQ04033 374 aaPredicted RBP2.97□□□□□ -1.93
NUP85YJR042W YPS3Q12303 508 aa2.97□□□□□ -1.93
NUP85YJR042W DGK1Q12382 290 aa2.97□□□□□ -1.93
NUP85YJR042W TSC3Q3E790 80 aa2.97□□□□□ -1.93
NUP85YJR042W CPR1P14832 162 aaKnown RBP2.96□□□□□ -1.94
NUP85YJR042W CDC43P18898 376 aa2.96□□□□□ -1.94
NUP85YJR042W RPB9P27999 122 aa2.96□□□□□ -1.94
NUP85YJR042W YBL010CP32788 280 aa2.96□□□□□ -1.94
NUP85YJR042W SFC1P33303 322 aa2.96□□□□□ -1.94
NUP85YJR042W RPF1P38805 295 aaKnown RBP2.96□□□□□ -1.94
NUP85YJR042W MOB1P40484 314 aa2.96□□□□□ -1.94
NUP85YJR042W SNO3P43544 222 aa2.96□□□□□ -1.94
NUP85YJR042W DOC1P53068 250 aa2.96□□□□□ -1.94
NUP85YJR042W SAY1P53324 424 aa2.96□□□□□ -1.94
NUP85YJR042W DIG2Q03373 323 aaKnown RBP2.96□□□□□ -1.94
NUP85YJR042W ECM19Q06011 112 aa2.96□□□□□ -1.94
NUP85YJR042W KEI1Q06346 221 aa2.96□□□□□ -1.94
NUP85YJR042W NAT3Q06504 195 aa2.96□□□□□ -1.94
NUP85YJR042W COS8P38723 381 aa2.96□□□□□ -1.94
NUP85YJR042W DLS1P40366 167 aa2.96□□□□□ -1.94
NUP85YJR042W TIR3P40552 269 aa2.96□□□□□ -1.94
NUP85YJR042W PAM16P42949 149 aa2.96□□□□□ -1.94
NUP85YJR042W HHT1P61830 136 aa2.96□□□□□ -1.94
NUP85YJR042W YMR252CQ04814 134 aa2.96□□□□□ -1.94
NUP85YJR042W PRP11Q07350 266 aaPredicted RBP2.96□□□□□ -1.94
NUP85YJR042W MCP1Q12106 302 aa2.96□□□□□ -1.94
NUP85YJR042W YGL194C-AQ2V2P6 80 aa2.96□□□□□ -1.94
NUP85YJR042W NAG1Q8TGN9 163 aa2.96□□□□□ -1.94
NUP85YJR042W REP2P03872 296 aa2.95□□□□□ -1.94
NUP85YJR042W ERG2P32352 222 aa2.95□□□□□ -1.94
NUP85YJR042W YBR220CP38318 560 aa2.95□□□□□ -1.94
NUP85YJR042W FYV4P38783 130 aaPredicted RBP2.95□□□□□ -1.94
NUP85YJR042W CNL1Q06333 122 aa2.95□□□□□ -1.94
NUP85YJR042W YCL001W-BQ96VH2 84 aa2.95□□□□□ -1.94
NUP85YJR042W PBI2P0CT04 75 aaKnown RBP2.95□□□□□ -1.94
NUP85YJR042W ATP15P21306 62 aa2.95□□□□□ -1.94
NUP85YJR042W MRP17P28778 131 aa2.95□□□□□ -1.94
NUP85YJR042W GLR1P41921 483 aaKnown RBP2.95□□□□□ -1.94
NUP85YJR042W OST2P46964 130 aa2.95□□□□□ -1.94
NUP85YJR042W SDH7Q04401 133 aa2.95□□□□□ -1.94
NUP85YJR042W MCH1Q07376 486 aa2.95□□□□□ -1.94
NUP85YJR042W YOR385WQ08909 290 aa2.95□□□□□ -1.94
NUP85YJR042W RPB3P16370 318 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms