RNA–Protein interactions for RNA: YJL020C

BBC1, Transcript of Protein possibly involved in assembly of actin patches, yeastyeast

Gene BBC1, Length 3,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BBC1YJL020C POP8P38208 133 aa3.67□□□□□ -1.82
BBC1YJL020C AST2P39945 430 aaKnown RBP3.67□□□□□ -1.82
BBC1YJL020C SKI6P46948 246 aaPredicted RBP3.67□□□□□ -1.82
BBC1YJL020C MPC1P53157 130 aaKnown RBP3.67□□□□□ -1.82
BBC1YJL020C SNU13P39990 126 aaKnown RBP3.67□□□□□ -1.82
BBC1YJL020C YDL211CQ12121 372 aa3.67□□□□□ -1.82
BBC1YJL020C SPC3Q12133 184 aa3.67□□□□□ -1.82
BBC1YJL020C ATO3Q12359 275 aa3.67□□□□□ -1.82
BBC1YJL020C HEM4P06174 275 aa3.66□□□□□ -1.82
BBC1YJL020C FMP46P36141 133 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C MRPL39P36533 70 aa3.66□□□□□ -1.82
BBC1YJL020C PRE5P40302 234 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C AVT7P40501 490 aa3.66□□□□□ -1.82
BBC1YJL020C BAT2P47176 376 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C RRG7Q08774 242 aaPredicted RBP3.66□□□□□ -1.82
BBC1YJL020C RPL15AP05748 204 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C CKS1P20486 150 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C MRPL20P22354 195 aaPredicted RBP3.66□□□□□ -1.82
BBC1YJL020C YCR022CP25620 114 aa3.66□□□□□ -1.82
BBC1YJL020C RPL16AP26784 199 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C RPB11P38902 120 aa3.66□□□□□ -1.82
BBC1YJL020C YNR062CP53748 327 aa3.66□□□□□ -1.82
BBC1YJL020C RPL15BP54780 204 aaPredicted RBP3.66□□□□□ -1.82
BBC1YJL020C YMR181CQ03231 154 aa3.66□□□□□ -1.82
BBC1YJL020C GRH1Q04410 372 aaKnown RBP3.66□□□□□ -1.82
BBC1YJL020C FCY1Q12178 158 aa3.66□□□□□ -1.82
BBC1YJL020C IZH2Q12442 317 aa3.66□□□□□ -1.82
BBC1YJL020C HUT1Q12520 339 aa3.66□□□□□ -1.82
BBC1YJL020C MOH1P38191 138 aa3.65□□□□□ -1.82
BBC1YJL020C SNO2P53823 222 aa3.65□□□□□ -1.82
BBC1YJL020C REP2P03872 296 aa3.65□□□□□ -1.83
BBC1YJL020C TIR1P10863 254 aa3.65□□□□□ -1.83
BBC1YJL020C YHR130CP38834 111 aa3.65□□□□□ -1.83
BBC1YJL020C YER188WP40103 239 aa3.65□□□□□ -1.83
BBC1YJL020C YJL218WP40892 196 aaKnown RBP3.65□□□□□ -1.83
BBC1YJL020C GON7P46984 123 aa3.65□□□□□ -1.83
BBC1YJL020C UIP4Q08926 304 aa3.65□□□□□ -1.83
BBC1YJL020C CCH1P50077 2039 aa3.65□□□□□ -1.83
BBC1YJL020C GLC7P32598 312 aaKnown RBP3.65□□□□□ -1.83
BBC1YJL020C YGL230CP53074 147 aa3.65□□□□□ -1.83
BBC1YJL020C RDL1Q12305 139 aaKnown RBP3.65□□□□□ -1.83
BBC1YJL020C AGA1P32323 725 aa3.64□□□□□ -1.83
BBC1YJL020C YGR018CP53211 109 aa3.64□□□□□ -1.83
BBC1YJL020C YPL162CQ12042 273 aa3.64□□□□□ -1.83
BBC1YJL020C COX9P07255 59 aa3.64□□□□□ -1.83
BBC1YJL020C HYP2P23301 157 aaKnown RBP3.64□□□□□ -1.83
BBC1YJL020C UTP30P36144 274 aaKnown RBP3.64□□□□□ -1.83
BBC1YJL020C CAT5P41735 233 aa3.64□□□□□ -1.83
BBC1YJL020C TDA4P47153 279 aa3.64□□□□□ -1.83
BBC1YJL020C SAY1P53324 424 aa3.64□□□□□ -1.83
BBC1YJL020C ELP6Q04868 273 aa3.64□□□□□ -1.83
BBC1YJL020C YLR346CQ06139 101 aa3.64□□□□□ -1.83
BBC1YJL020C RNQ1P25367 405 aa3.64□□□□□ -1.83
BBC1YJL020C YAR029WP39549 74 aa3.64□□□□□ -1.83
BBC1YJL020C GEP7P53171 287 aa3.64□□□□□ -1.83
BBC1YJL020C NRM1P53718 249 aa3.64□□□□□ -1.83
BBC1YJL020C BUD25P85052 153 aa3.64□□□□□ -1.83
BBC1YJL020C PCL9Q12477 304 aa3.64□□□□□ -1.83
BBC1YJL020C YPR014CQ6B0W2 109 aa3.64□□□□□ -1.83
BBC1YJL020C EDC2P40023 145 aaPredicted RBP3.63□□□□□ -1.83
BBC1YJL020C TIF34P40217 347 aaKnown RBP3.63□□□□□ -1.83
BBC1YJL020C ELC1Q03071 99 aa3.63□□□□□ -1.83
BBC1YJL020C YFR032C-BQ8TGU2 87 aa3.63□□□□□ -1.83
BBC1YJL020C ERG4P25340 473 aa3.63□□□□□ -1.83
BBC1YJL020C SDS23P53172 527 aa3.63□□□□□ -1.83
BBC1YJL020C FCF1Q05498 189 aaPredicted RBP3.63□□□□□ -1.83
BBC1YJL020C BOL1Q3E793 110 aa3.63□□□□□ -1.83
BBC1YJL020C ATP5P09457 212 aa3.63□□□□□ -1.83
BBC1YJL020C YOL162WP0CF19 215 aa3.63□□□□□ -1.83
BBC1YJL020C TOM40P23644 387 aaKnown RBP3.63□□□□□ -1.83
BBC1YJL020C SRP21P32342 167 aa3.63□□□□□ -1.83
BBC1YJL020C SNO3P43544 222 aa3.63□□□□□ -1.83
BBC1YJL020C GTT1P40582 234 aa3.62□□□□□ -1.83
BBC1YJL020C PFS2P42841 465 aaKnown RBP3.62□□□□□ -1.83
BBC1YJL020C NSE4P43124 402 aa3.62□□□□□ -1.83
BBC1YJL020C GPI2P46961 280 aa3.62□□□□□ -1.83
BBC1YJL020C SBH1P52870 82 aa3.62□□□□□ -1.83
BBC1YJL020C CTL1Q03220 320 aaKnown RBP3.62□□□□□ -1.83
BBC1YJL020C RPS8AP0CX39 200 aaKnown RBP3.62□□□□□ -1.83
BBC1YJL020C RPS8BP0CX40 200 aaKnown RBP3.62□□□□□ -1.83
BBC1YJL020C BGL2P15703 313 aaKnown RBP3.62□□□□□ -1.83
BBC1YJL020C ALG9P53868 555 aaKnown RBP3.62□□□□□ -1.83
BBC1YJL020C YCL001W-AP87012 153 aa3.62□□□□□ -1.83
BBC1YJL020C MCP1Q12106 302 aa3.62□□□□□ -1.83
BBC1YJL020C YAL063C-AQ3E791 96 aa3.62□□□□□ -1.83
BBC1YJL020C YEL009C-AA0A023PZF2 135 aa3.61□□□□□ -1.83
BBC1YJL020C STF2P16965 84 aa3.61□□□□□ -1.83
BBC1YJL020C ADD37Q03233 198 aa3.61□□□□□ -1.83
BBC1YJL020C YMR252CQ04814 134 aa3.61□□□□□ -1.83
BBC1YJL020C SCW10Q04951 389 aa3.61□□□□□ -1.83
BBC1YJL020C TIM9O74700 87 aa3.61□□□□□ -1.83
BBC1YJL020C COQ2P32378 372 aa3.61□□□□□ -1.83
BBC1YJL020C SCM4P32564 187 aa3.61□□□□□ -1.83
BBC1YJL020C YBR090CP38253 122 aa3.61□□□□□ -1.83
BBC1YJL020C PAU12P53343 120 aa3.61□□□□□ -1.83
BBC1YJL020C MRPS16Q02608 121 aa3.61□□□□□ -1.83
BBC1YJL020C YOR376W-AQ3E805 51 aa3.61□□□□□ -1.83
BBC1YJL020C PUB1P32588 453 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
BBC1YJL020C YIL086CP40503 102 aa3.61□□□□□ -1.83
BBC1YJL020C CUP9P41817 306 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms