RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A BUD25P85052 153 aa2.22□□□□□ -2.05
EFG1YGR271C-A SAE3P89114 91 aa2.22□□□□□ -2.05
EFG1YGR271C-A EST3Q03096 181 aa2.22□□□□□ -2.05
EFG1YGR271C-A AIM36Q03798 255 aa2.22□□□□□ -2.05
EFG1YGR271C-A HRT1Q08273 121 aa2.22□□□□□ -2.05
EFG1YGR271C-A FYV12Q08559 129 aa2.22□□□□□ -2.05
EFG1YGR271C-A FSF1Q12029 327 aaKnown RBP2.22□□□□□ -2.05
EFG1YGR271C-A FCF2Q12035 217 aaPredicted RBP2.22□□□□□ -2.05
EFG1YGR271C-A YPR063CQ12160 140 aa2.22□□□□□ -2.05
EFG1YGR271C-A ATP20Q12233 115 aa2.22□□□□□ -2.05
EFG1YGR271C-A ADK1P07170 222 aaKnown RBP2.21□□□□□ -2.06
EFG1YGR271C-A YBL010CP32788 280 aa2.21□□□□□ -2.06
EFG1YGR271C-A YEL028WP39989 153 aa2.21□□□□□ -2.06
EFG1YGR271C-A YIR035CP40579 254 aa2.21□□□□□ -2.06
EFG1YGR271C-A YNR062CP53748 327 aa2.21□□□□□ -2.06
EFG1YGR271C-A CWC27Q02770 301 aa2.21□□□□□ -2.06
EFG1YGR271C-A TMA23Q03525 211 aa2.21□□□□□ -2.06
EFG1YGR271C-A YDR102CQ03864 110 aa2.21□□□□□ -2.06
EFG1YGR271C-A SHH3Q04487 196 aa2.21□□□□□ -2.06
EFG1YGR271C-A YMR253CQ04835 414 aa2.21□□□□□ -2.06
EFG1YGR271C-A RRT1P38192 103 aa2.2□□□□□ -2.06
EFG1YGR271C-A DOC1P53068 250 aa2.2□□□□□ -2.06
EFG1YGR271C-A EMC4P53073 190 aa2.2□□□□□ -2.06
EFG1YGR271C-A GEP7P53171 287 aa2.2□□□□□ -2.06
EFG1YGR271C-A MPC3P53311 146 aa2.2□□□□□ -2.06
EFG1YGR271C-A ELC1Q03071 99 aa2.2□□□□□ -2.06
EFG1YGR271C-A SPP41P38904 1435 aa2.19□□□□□ -2.06
EFG1YGR271C-A DDI2P0CH63 225 aa2.19□□□□□ -2.06
EFG1YGR271C-A DDI3P0CH64 225 aa2.19□□□□□ -2.06
EFG1YGR271C-A GPA2P10823 449 aa2.19□□□□□ -2.06
EFG1YGR271C-A DDR48P18899 430 aaKnown RBP2.19□□□□□ -2.06
EFG1YGR271C-A YKR070WP36151 352 aaKnown RBP2.19□□□□□ -2.06
EFG1YGR271C-A ETR1P38071 380 aa2.19□□□□□ -2.06
EFG1YGR271C-A YHR180WP38868 163 aa2.19□□□□□ -2.06
EFG1YGR271C-A YEL073CP39974 107 aa2.19□□□□□ -2.06
EFG1YGR271C-A YER135CP40082 130 aa2.19□□□□□ -2.06
EFG1YGR271C-A RIO2P40160 425 aaKnown RBP2.19□□□□□ -2.06
EFG1YGR271C-A EAF6P47128 113 aa2.19□□□□□ -2.06
EFG1YGR271C-A RPS12P48589 143 aaKnown RBP2.19□□□□□ -2.06
EFG1YGR271C-A YNR064CP53750 290 aa2.19□□□□□ -2.06
EFG1YGR271C-A GRX5Q02784 150 aa2.19□□□□□ -2.06
EFG1YGR271C-A LIP1Q03579 150 aa2.19□□□□□ -2.06
EFG1YGR271C-A TVP18Q04767 167 aa2.19□□□□□ -2.06
EFG1YGR271C-A ANT1Q06497 328 aa2.19□□□□□ -2.06
EFG1YGR271C-A RRT7Q07829 113 aa2.19□□□□□ -2.06
EFG1YGR271C-A BUD23P25627 275 aaPredicted RBP2.18□□□□□ -2.06
EFG1YGR271C-A SCM4P32564 187 aa2.18□□□□□ -2.06
EFG1YGR271C-A YET1P35723 206 aa2.18□□□□□ -2.06
EFG1YGR271C-A SPG1P50088 95 aa2.18□□□□□ -2.06
EFG1YGR271C-A ZEO1Q08245 113 aa2.18□□□□□ -2.06
EFG1YGR271C-A KTI11Q3E840 82 aa2.18□□□□□ -2.06
EFG1YGR271C-A SPS2P08459 502 aa2.17□□□□□ -2.06
EFG1YGR271C-A ANB1P19211 157 aa2.17□□□□□ -2.06
EFG1YGR271C-A FZF1P32805 299 aa2.17□□□□□ -2.06
EFG1YGR271C-A PAM17P36147 197 aa2.17□□□□□ -2.06
EFG1YGR271C-A RPB11P38902 120 aa2.17□□□□□ -2.06
EFG1YGR271C-A YNL217WP40152 326 aa2.17□□□□□ -2.06
EFG1YGR271C-A PHS1P40857 217 aa2.17□□□□□ -2.06
EFG1YGR271C-A YJL144WP47009 104 aa2.17□□□□□ -2.06
EFG1YGR271C-A RNH202Q05635 350 aa2.17□□□□□ -2.06
EFG1YGR271C-A ATG10Q07879 167 aa2.17□□□□□ -2.06
EFG1YGR271C-A HUT1Q12520 339 aa2.17□□□□□ -2.06
EFG1YGR271C-A MYO2P19524 1574 aaKnown RBP2.17□□□□□ -2.06
EFG1YGR271C-A HSL1P34244 1518 aa2.17□□□□□ -2.06
EFG1YGR271C-A RPS23AP0CX29 145 aaKnown RBP2.16□□□□□ -2.06
EFG1YGR271C-A RPS23BP0CX30 145 aa2.16□□□□□ -2.06
EFG1YGR271C-A MDH2P22133 377 aa2.16□□□□□ -2.06
EFG1YGR271C-A MRS4P23500 304 aa2.16□□□□□ -2.06
EFG1YGR271C-A YPT31P38555 223 aaKnown RBP2.16□□□□□ -2.06
EFG1YGR271C-A RPL33BP41056 107 aaKnown RBP2.16□□□□□ -2.06
EFG1YGR271C-A PAC10P48363 199 aa2.16□□□□□ -2.06
EFG1YGR271C-A YDR114CQ04597 100 aa2.16□□□□□ -2.06
EFG1YGR271C-A YLR042CQ07990 161 aa2.16□□□□□ -2.06
EFG1YGR271C-A IRC23Q08416 157 aa2.16□□□□□ -2.06
EFG1YGR271C-A YOR381W-AQ3E804 55 aa2.16□□□□□ -2.06
EFG1YGR271C-A ATG40Q99325 256 aa2.16□□□□□ -2.06
EFG1YGR271C-A YER039C-AP0CD97 72 aa2.15□□□□□ -2.07
EFG1YGR271C-A YOL162WP0CF19 215 aa2.15□□□□□ -2.07
EFG1YGR271C-A YOR062CP36025 268 aa2.15□□□□□ -2.07
EFG1YGR271C-A TVP23P38962 199 aa2.15□□□□□ -2.07
EFG1YGR271C-A PIR5P46999 287 aa2.15□□□□□ -2.07
EFG1YGR271C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
EFG1YGR271C-A UIP4Q08926 304 aa2.15□□□□□ -2.07
EFG1YGR271C-A SCS22Q6Q595 175 aa2.15□□□□□ -2.07
EFG1YGR271C-A YCL001W-BQ96VH2 84 aa2.15□□□□□ -2.07
EFG1YGR271C-A RAS2P01120 322 aaKnown RBP2.14□□□□□ -2.07
EFG1YGR271C-A VAR1P02381 398 aa2.14□□□□□ -2.07
EFG1YGR271C-A RPL26AP05743 127 aaKnown RBP2.14□□□□□ -2.07
EFG1YGR271C-A YCR050CP25630 102 aa2.14□□□□□ -2.07
EFG1YGR271C-A SFT2P38166 215 aa2.14□□□□□ -2.07
EFG1YGR271C-A MPM1P40364 252 aa2.14□□□□□ -2.07
EFG1YGR271C-A YIL059CP40520 121 aa2.14□□□□□ -2.07
EFG1YGR271C-A LSM8P47093 109 aaKnown RBP2.14□□□□□ -2.07
EFG1YGR271C-A YGL230CP53074 147 aa2.14□□□□□ -2.07
EFG1YGR271C-A RPL26BP53221 127 aaKnown RBP2.14□□□□□ -2.07
EFG1YGR271C-A SAY1P53324 424 aa2.14□□□□□ -2.07
EFG1YGR271C-A YNR077CP53758 84 aa2.14□□□□□ -2.07
EFG1YGR271C-A ATP19P81451 68 aa2.14□□□□□ -2.07
EFG1YGR271C-A RIM9Q04734 239 aa2.14□□□□□ -2.07
EFG1YGR271C-A YOR015WQ12169 119 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms