RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W DML1Q03652 475 aa1.12□□□□□ -2.23
SMD1YGR074W SYM1Q06563 197 aa1.12□□□□□ -2.23
SMD1YGR074W FIT2Q08906 153 aa1.12□□□□□ -2.23
SMD1YGR074W UIP4Q08926 304 aa1.12□□□□□ -2.23
SMD1YGR074W EFG1Q3E705 233 aaKnown RBP1.12□□□□□ -2.23
SMD1YGR074W YMR030W-AQ3E760 96 aa1.12□□□□□ -2.23
SMD1YGR074W UBR1P19812 1950 aa1.11□□□□□ -2.23
SMD1YGR074W ATP5P09457 212 aa1.11□□□□□ -2.23
SMD1YGR074W UBI4P0CG63 381 aaKnown RBP1.11□□□□□ -2.23
SMD1YGR074W CSH1P38287 376 aa1.11□□□□□ -2.23
SMD1YGR074W YEL073CP39974 107 aa1.11□□□□□ -2.23
SMD1YGR074W YEL028WP39989 153 aa1.11□□□□□ -2.23
SMD1YGR074W YNL200CP40165 246 aaKnown RBP1.11□□□□□ -2.23
SMD1YGR074W APQ12P40532 138 aa1.11□□□□□ -2.23
SMD1YGR074W YAE1P47118 141 aaPredicted RBP1.11□□□□□ -2.23
SMD1YGR074W YGL193CP53097 103 aa1.11□□□□□ -2.23
SMD1YGR074W NQM1P53228 333 aaPredicted RBP1.11□□□□□ -2.23
SMD1YGR074W UBC7Q02159 165 aa1.11□□□□□ -2.23
SMD1YGR074W YML079WQ03629 201 aa1.11□□□□□ -2.23
SMD1YGR074W YHP1Q04116 353 aa1.11□□□□□ -2.23
SMD1YGR074W RIM9Q04734 239 aa1.11□□□□□ -2.23
SMD1YGR074W YPD1Q07688 167 aa1.11□□□□□ -2.23
SMD1YGR074W YDL157CQ12082 118 aa1.11□□□□□ -2.23
SMD1YGR074W PET20Q99373 253 aa1.11□□□□□ -2.23
SMD1YGR074W RPL30P14120 105 aaKnown RBP1.1□□□□□ -2.23
SMD1YGR074W SEN2P16658 377 aa1.1□□□□□ -2.23
SMD1YGR074W MAK31P23059 88 aa1.1□□□□□ -2.23
SMD1YGR074W CPR5P35176 225 aa1.1□□□□□ -2.23
SMD1YGR074W YHL042WP38729 150 aa1.1□□□□□ -2.23
SMD1YGR074W HTD2P38790 280 aaKnown RBP1.1□□□□□ -2.23
SMD1YGR074W RAV2Q03956 351 aa1.1□□□□□ -2.23
SMD1YGR074W UPS1Q05776 175 aa1.1□□□□□ -2.23
SMD1YGR074W YPR202WQ08993 238 aa1.1□□□□□ -2.23
SMD1YGR074W YOR381W-AQ3E804 55 aa1.1□□□□□ -2.23
SMD1YGR074W SPA2P23201 1466 aaKnown RBP1.1□□□□□ -2.23
SMD1YGR074W PET54P10834 293 aa1.09□□□□□ -2.23
SMD1YGR074W YBL010CP32788 280 aa1.09□□□□□ -2.23
SMD1YGR074W SLM6P38343 150 aa1.09□□□□□ -2.23
SMD1YGR074W YAP3P38749 330 aa1.09□□□□□ -2.23
SMD1YGR074W CCS1P40202 249 aaKnown RBP1.09□□□□□ -2.23
SMD1YGR074W NSE4P43124 402 aa1.09□□□□□ -2.23
SMD1YGR074W PKR1Q03880 122 aaKnown RBP1.09□□□□□ -2.23
SMD1YGR074W ACC1Q00955 2233 aaKnown RBP1.09□□□□□ -2.24
SMD1YGR074W YOR1P53049 1477 aa1.08□□□□□ -2.24
SMD1YGR074W PAC10P48363 199 aa1.08□□□□□ -2.24
SMD1YGR074W ORM1P53224 222 aa1.08□□□□□ -2.24
SMD1YGR074W YNR064CP53750 290 aa1.08□□□□□ -2.24
SMD1YGR074W RRT7Q07829 113 aa1.08□□□□□ -2.24
SMD1YGR074W ATG10Q07879 167 aa1.08□□□□□ -2.24
SMD1YGR074W SPS2P08459 502 aa1.07□□□□□ -2.24
SMD1YGR074W PRE1P22141 198 aaKnown RBP1.07□□□□□ -2.24
SMD1YGR074W YEL067CP39978 195 aa1.07□□□□□ -2.24
SMD1YGR074W YGR269WP40326 108 aa1.07□□□□□ -2.24
SMD1YGR074W MPM1P40364 252 aa1.07□□□□□ -2.24
SMD1YGR074W YJR015WP47090 510 aa1.07□□□□□ -2.24
SMD1YGR074W CCC1P47818 322 aa1.07□□□□□ -2.24
SMD1YGR074W GEP7P53171 287 aa1.07□□□□□ -2.24
SMD1YGR074W ATP19P81451 68 aa1.07□□□□□ -2.24
SMD1YGR074W YGL041W-AP0C5N3 154 aa1.06□□□□□ -2.24
SMD1YGR074W YCL042WP25572 119 aa1.06□□□□□ -2.24
SMD1YGR074W UBC8P28263 218 aa1.06□□□□□ -2.24
SMD1YGR074W CIN5P40917 295 aa1.06□□□□□ -2.24
SMD1YGR074W FIP1P45976 327 aa1.06□□□□□ -2.24
SMD1YGR074W YMR252CQ04814 134 aa1.06□□□□□ -2.24
SMD1YGR074W ADE6P38972 1358 aaKnown RBP1.06□□□□□ -2.24
SMD1YGR074W RPS25BP0C0T4 108 aaKnown RBP1.05□□□□□ -2.24
SMD1YGR074W AHT1P29589 182 aa1.05□□□□□ -2.24
SMD1YGR074W YPT31P38555 223 aaKnown RBP1.05□□□□□ -2.24
SMD1YGR074W YFL065CP43539 102 aa1.05□□□□□ -2.24
SMD1YGR074W LSM1P47017 172 aaKnown RBP1.05□□□□□ -2.24
SMD1YGR074W MOG1P47123 218 aa1.05□□□□□ -2.24
SMD1YGR074W YMR007WQ03675 126 aa1.05□□□□□ -2.24
SMD1YGR074W YDR102CQ03864 110 aa1.05□□□□□ -2.24
SMD1YGR074W ELP6Q04868 273 aa1.05□□□□□ -2.24
SMD1YGR074W YPR114WQ06107 315 aa1.05□□□□□ -2.24
SMD1YGR074W PST2Q12335 198 aaKnown RBP1.05□□□□□ -2.24
SMD1YGR074W RPS25AQ3E792 108 aaPredicted RBP1.05□□□□□ -2.24
SMD1YGR074W VAR1P02381 398 aa1.04□□□□□ -2.24
SMD1YGR074W ETR1P38071 380 aa1.04□□□□□ -2.24
SMD1YGR074W YEL008WP40001 126 aa1.04□□□□□ -2.24
SMD1YGR074W YER181CP40097 107 aa1.04□□□□□ -2.24
SMD1YGR074W KEI1Q06346 221 aa1.04□□□□□ -2.24
SMD1YGR074W YHR212W-AP0CX91 67 aa1.03□□□□□ -2.24
SMD1YGR074W ECM31P38122 312 aa1.03□□□□□ -2.24
SMD1YGR074W IPI1P38803 334 aaPredicted RBP1.03□□□□□ -2.24
SMD1YGR074W GPI2P46961 280 aa1.03□□□□□ -2.24
SMD1YGR074W YDR366CP87287 132 aa1.03□□□□□ -2.24
SMD1YGR074W COA3Q3E7B2 85 aa1.03□□□□□ -2.24
SMD1YGR074W TAF2P23255 1407 aa1.03□□□□□ -2.24
SMD1YGR074W SLH1P53327 1967 aaKnown RBP1.03□□□□□ -2.25
SMD1YGR074W INO4P13902 151 aa1.02□□□□□ -2.25
SMD1YGR074W PHO13P19881 312 aa1.02□□□□□ -2.25
SMD1YGR074W MRPL15P36523 253 aa1.02□□□□□ -2.25
SMD1YGR074W MRPL24P36525 258 aaPredicted RBP1.02□□□□□ -2.25
SMD1YGR074W YBR242WP38331 238 aa1.02□□□□□ -2.25
SMD1YGR074W EST3Q03096 181 aa1.02□□□□□ -2.25
SMD1YGR074W FMN1Q03778 218 aa1.02□□□□□ -2.25
SMD1YGR074W NMA1Q06178 401 aaKnown RBP1.02□□□□□ -2.25
SMD1YGR074W VAM10Q08474 114 aa1.02□□□□□ -2.25
SMD1YGR074W TAR1Q8TGM6 124 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms