RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	EFM5	P53200	248 aa	Known RBP	0.76	□□□□□ -2.29
VMA7	YGR020C	YOR214C	Q12282	236 aa		0.76	□□□□□ -2.29
VMA7	YGR020C	SEC14	P24280	304 aa	Known RBP	0.75	□□□□□ -2.29
VMA7	YGR020C	TRR1	P29509	319 aa	Known RBP	0.75	□□□□□ -2.29
VMA7	YGR020C	VPS51	P36116	164 aa		0.75	□□□□□ -2.29
VMA7	YGR020C	SHB17	P36136	271 aa	Known RBP	0.75	□□□□□ -2.29
VMA7	YGR020C	AME1	P38313	324 aa		0.75	□□□□□ -2.29
VMA7	YGR020C	YNL200C	P40165	246 aa	Known RBP	0.75	□□□□□ -2.29
VMA7	YGR020C	YNL140C	P53910	189 aa		0.75	□□□□□ -2.29
VMA7	YGR020C	YDC1	Q02896	317 aa		0.75	□□□□□ -2.29
VMA7	YGR020C	YPR127W	Q06494	345 aa		0.75	□□□□□ -2.29
VMA7	YGR020C	YET3	Q07451	203 aa		0.75	□□□□□ -2.29
VMA7	YGR020C	DUR1,2	P32528	1835 aa	Known RBP	0.74	□□□□□ -2.29
VMA7	YGR020C	QCR2	P07257	368 aa		0.74	□□□□□ -2.29
VMA7	YGR020C	RPS28B	P0C0X0	67 aa	Known RBP	0.74	□□□□□ -2.29
VMA7	YGR020C	PRE1	P22141	198 aa	Known RBP	0.74	□□□□□ -2.29
VMA7	YGR020C	UBC6	P33296	250 aa	Predicted RBP	0.74	□□□□□ -2.29
VMA7	YGR020C	MOB1	P40484	314 aa		0.74	□□□□□ -2.29
VMA7	YGR020C	AVO2	Q04749	426 aa		0.74	□□□□□ -2.29
VMA7	YGR020C	KEI1	Q06346	221 aa		0.74	□□□□□ -2.29
VMA7	YGR020C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.74	□□□□□ -2.29
VMA7	YGR020C	YLR422W	Q06409	1932 aa		0.74	□□□□□ -2.29
VMA7	YGR020C	CLG1	P35190	452 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	FIG1	P38224	298 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	FES1	P38260	290 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	DER1	P38307	211 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	NVJ1	P38881	321 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	YGL230C	P53074	147 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	JAC1	P53193	184 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	TIM13	P53299	105 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	HPT1	Q04178	221 aa	Known RBP	0.73	□□□□□ -2.29
VMA7	YGR020C	PEX11	Q12462	236 aa		0.73	□□□□□ -2.29
VMA7	YGR020C	TTI2	P47168	421 aa		0.72	□□□□□ -2.29
VMA7	YGR020C	SOL1	P50278	321 aa		0.72	□□□□□ -2.29
VMA7	YGR020C	TMA23	Q03525	211 aa		0.72	□□□□□ -2.29
VMA7	YGR020C	YLR050C	Q12155	161 aa	Known RBP	0.72	□□□□□ -2.29
VMA7	YGR020C	PET20	Q99373	253 aa		0.72	□□□□□ -2.29
VMA7	YGR020C	RAD6	P06104	172 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	CMD1	P06787	147 aa	Known RBP	0.71	□□□□□ -2.3
VMA7	YGR020C	CSH1	P38287	376 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	PAC10	P48363	199 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	NQM1	P53228	333 aa	Predicted RBP	0.71	□□□□□ -2.3
VMA7	YGR020C	HSK3	P69852	69 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	YLR053C	Q12026	108 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	YDL157C	Q12082	118 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	RDI1	Q12434	202 aa		0.71	□□□□□ -2.3
VMA7	YGR020C	PET54	P10834	293 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	YCR001W	P25347	104 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	ACP1	P32463	125 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	SLM6	P38343	150 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	YEL073C	P39974	107 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	MAK3	Q03503	176 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	YML079W	Q03629	201 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	YPR202W	Q08993	238 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	NSL1	Q12143	216 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	FCY1	Q12178	158 aa		0.7	□□□□□ -2.3
VMA7	YGR020C	UBI4	P0CG63	381 aa	Known RBP	0.69	□□□□□ -2.3
VMA7	YGR020C	PEX34	P25584	144 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	BUB2	P26448	306 aa	Predicted RBP	0.69	□□□□□ -2.3
VMA7	YGR020C	SRP102	P36057	244 aa	Predicted RBP	0.69	□□□□□ -2.3
VMA7	YGR020C	YAP3	P38749	330 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	LSM1	P47017	172 aa	Known RBP	0.69	□□□□□ -2.3
VMA7	YGR020C	YGL101W	P53144	215 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	YDR476C	Q03362	224 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	PLP1	Q04004	230 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	THI74	Q04083	370 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	HRD1	Q08109	551 aa		0.69	□□□□□ -2.3
VMA7	YGR020C	YGR269W	P40326	108 aa		0.68	□□□□□ -2.3
VMA7	YGR020C	ORM1	P53224	222 aa		0.68	□□□□□ -2.3
VMA7	YGR020C	EFG1	Q3E705	233 aa	Known RBP	0.68	□□□□□ -2.3
VMA7	YGR020C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.67	□□□□□ -2.3
VMA7	YGR020C	CYC2	P38909	366 aa		0.67	□□□□□ -2.3
VMA7	YGR020C	GLR1	P41921	483 aa	Known RBP	0.67	□□□□□ -2.3
VMA7	YGR020C	LSM3	P57743	89 aa	Known RBP	0.67	□□□□□ -2.3
VMA7	YGR020C	TMA20	P89886	181 aa	Predicted RBP	0.67	□□□□□ -2.3
VMA7	YGR020C	SPC2	Q04969	178 aa		0.67	□□□□□ -2.3
VMA7	YGR020C	YLR046C	Q12253	270 aa		0.67	□□□□□ -2.3
VMA7	YGR020C	RIB3	Q99258	208 aa		0.67	□□□□□ -2.3
VMA7	YGR020C	YOR1	P53049	1477 aa		0.67	□□□□□ -2.3
VMA7	YGR020C	TRM3	Q07527	1436 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	KIN28	P06242	306 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	PBI2	P0CT04	75 aa	Known RBP	0.66	□□□□□ -2.3
VMA7	YGR020C	RPL30	P14120	105 aa	Known RBP	0.66	□□□□□ -2.3
VMA7	YGR020C	PTC1	P35182	281 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	IPI1	P38803	334 aa	Predicted RBP	0.66	□□□□□ -2.3
VMA7	YGR020C	YEL028W	P39989	153 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	GIM4	P40005	111 aa	Known RBP	0.66	□□□□□ -2.3
VMA7	YGR020C	APQ12	P40532	138 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	YGR201C	P42936	225 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	MOG1	P47123	218 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	XPT1	P47165	209 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	YGL204C	P53089	101 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	YGL193C	P53097	103 aa		0.66	□□□□□ -2.3
VMA7	YGR020C	ATP5	P09457	212 aa		0.65	□□□□□ -2.31
VMA7	YGR020C	RPS25B	P0C0T4	108 aa	Known RBP	0.65	□□□□□ -2.31
VMA7	YGR020C	SPT14	P32363	452 aa		0.65	□□□□□ -2.31
VMA7	YGR020C	NUF2	P33895	451 aa		0.65	□□□□□ -2.31
VMA7	YGR020C	POP7	P38291	140 aa		0.65	□□□□□ -2.31
VMA7	YGR020C	DLS1	P40366	167 aa		0.65	□□□□□ -2.31
VMA7	YGR020C	YJL218W	P40892	196 aa	Known RBP	0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms