RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RPL30P14120 105 aaKnown RBP1.66□□□□□ -2.14
SEC4YFL005W PHO85P17157 305 aa1.66□□□□□ -2.14
SEC4YFL005W CUP9P41817 306 aa1.66□□□□□ -2.14
SEC4YFL005W TTI2P47168 421 aa1.66□□□□□ -2.14
SEC4YFL005W FRQ1Q06389 190 aa1.66□□□□□ -2.14
SEC4YFL005W PRP11Q07350 266 aaPredicted RBP1.66□□□□□ -2.14
SEC4YFL005W Q0144Q9ZZW2 109 aa1.66□□□□□ -2.14
SEC4YFL005W MDM35O60200 86 aa1.65□□□□□ -2.15
SEC4YFL005W PTC1P35182 281 aa1.65□□□□□ -2.15
SEC4YFL005W VMA7P39111 118 aa1.65□□□□□ -2.15
SEC4YFL005W APS3P47064 194 aa1.65□□□□□ -2.15
SEC4YFL005W RCF2P53721 224 aa1.65□□□□□ -2.15
SEC4YFL005W DAD4P69851 72 aa1.65□□□□□ -2.15
SEC4YFL005W APS2Q00381 147 aa1.65□□□□□ -2.15
SEC4YFL005W THI74Q04083 370 aa1.65□□□□□ -2.15
SEC4YFL005W CNL1Q06333 122 aa1.65□□□□□ -2.15
SEC4YFL005W HRD1Q08109 551 aa1.65□□□□□ -2.15
SEC4YFL005W FCY1Q12178 158 aa1.65□□□□□ -2.15
SEC4YFL005W YOR214CQ12282 236 aa1.65□□□□□ -2.15
SEC4YFL005W DGK1Q12382 290 aa1.65□□□□□ -2.15
SEC4YFL005W WIP1Q2V2P8 89 aa1.65□□□□□ -2.15
SEC4YFL005W ATP5P09457 212 aa1.64□□□□□ -2.15
SEC4YFL005W NSP1P14907 823 aaKnown RBP1.64□□□□□ -2.15
SEC4YFL005W RPS1AP33442 255 aaKnown RBP1.64□□□□□ -2.15
SEC4YFL005W PAM17P36147 197 aa1.64□□□□□ -2.15
SEC4YFL005W SPC25P40014 221 aa1.64□□□□□ -2.15
SEC4YFL005W FLX1P40464 311 aa1.64□□□□□ -2.15
SEC4YFL005W GPI2P46961 280 aa1.64□□□□□ -2.15
SEC4YFL005W VPS28Q02767 242 aa1.64□□□□□ -2.15
SEC4YFL005W ARL3Q02804 198 aa1.64□□□□□ -2.15
SEC4YFL005W DIG2Q03373 323 aaKnown RBP1.64□□□□□ -2.15
SEC4YFL005W YMR253CQ04835 414 aa1.64□□□□□ -2.15
SEC4YFL005W RNH202Q05635 350 aa1.64□□□□□ -2.15
SEC4YFL005W DAS2Q12084 232 aa1.64□□□□□ -2.15
SEC4YFL005W YPR013CQ12145 317 aa1.64□□□□□ -2.15
SEC4YFL005W RAD6P06104 172 aa1.63□□□□□ -2.15
SEC4YFL005W HSP30P25619 332 aa1.63□□□□□ -2.15
SEC4YFL005W SRP21P32342 167 aa1.63□□□□□ -2.15
SEC4YFL005W YBL010CP32788 280 aa1.63□□□□□ -2.15
SEC4YFL005W RPS20P38701 121 aaKnown RBP1.63□□□□□ -2.15
SEC4YFL005W SOL1P50278 321 aa1.63□□□□□ -2.15
SEC4YFL005W YGL193CP53097 103 aa1.63□□□□□ -2.15
SEC4YFL005W YGR017WP53210 297 aa1.63□□□□□ -2.15
SEC4YFL005W YNL033WP53964 284 aa1.63□□□□□ -2.15
SEC4YFL005W RCE1Q03530 315 aa1.63□□□□□ -2.15
SEC4YFL005W FMN1Q03778 218 aa1.63□□□□□ -2.15
SEC4YFL005W YIR021W-AQ3E739 70 aa1.63□□□□□ -2.15
SEC4YFL005W YNL146C-AQ3E7Z1 64 aa1.63□□□□□ -2.15
SEC4YFL005W RIB3Q99258 208 aa1.63□□□□□ -2.15
SEC4YFL005W TRM3Q07527 1436 aa1.63□□□□□ -2.15
SEC4YFL005W MSB2P32334 1306 aa1.63□□□□□ -2.15
SEC4YFL005W UBR1P19812 1950 aa1.62□□□□□ -2.15
SEC4YFL005W KIN28P06242 306 aa1.62□□□□□ -2.15
SEC4YFL005W SFK1P35735 353 aa1.62□□□□□ -2.15
SEC4YFL005W YHL018WP38744 120 aaPredicted RBP1.62□□□□□ -2.15
SEC4YFL005W RGI1P40043 161 aaPredicted RBP1.62□□□□□ -2.15
SEC4YFL005W NSA2P40078 261 aaKnown RBP1.62□□□□□ -2.15
SEC4YFL005W RIO2P40160 425 aaKnown RBP1.62□□□□□ -2.15
SEC4YFL005W YAE1P47118 141 aaPredicted RBP1.62□□□□□ -2.15
SEC4YFL005W ORM1P53224 222 aa1.62□□□□□ -2.15
SEC4YFL005W YKR005CQ02203 525 aa1.62□□□□□ -2.15
SEC4YFL005W YNL277W-AQ3E7Z0 62 aa1.62□□□□□ -2.15
SEC4YFL005W YOR304C-AO14468 76 aa1.61□□□□□ -2.15
SEC4YFL005W RPS1BP23248 255 aaKnown RBP1.61□□□□□ -2.15
SEC4YFL005W MRP49P32388 137 aa1.61□□□□□ -2.15
SEC4YFL005W SUI1P32911 108 aaKnown RBP1.61□□□□□ -2.15
SEC4YFL005W HTD2P38790 280 aaKnown RBP1.61□□□□□ -2.15
SEC4YFL005W YER181CP40097 107 aa1.61□□□□□ -2.15
SEC4YFL005W SPG1P50088 95 aa1.61□□□□□ -2.15
SEC4YFL005W SBH1P52870 82 aa1.61□□□□□ -2.15
SEC4YFL005W THG1P53215 237 aaKnown RBP1.61□□□□□ -2.15
SEC4YFL005W YNL019CP53975 284 aa1.61□□□□□ -2.15
SEC4YFL005W AIM11P87275 137 aa1.61□□□□□ -2.15
SEC4YFL005W CWC27Q02770 301 aa1.61□□□□□ -2.15
SEC4YFL005W YMR320WQ04897 101 aa1.61□□□□□ -2.15
SEC4YFL005W RRT7Q07829 113 aa1.61□□□□□ -2.15
SEC4YFL005W SPC3Q12133 184 aa1.61□□□□□ -2.15
SEC4YFL005W SKI3P17883 1432 aaKnown RBP1.6□□□□□ -2.15
SEC4YFL005W COX8P04039 78 aa1.6□□□□□ -2.15
SEC4YFL005W HPM1P40481 377 aa1.6□□□□□ -2.15
SEC4YFL005W GLC8P41818 229 aa1.6□□□□□ -2.15
SEC4YFL005W FIP1P45976 327 aa1.6□□□□□ -2.15
SEC4YFL005W MPC1P53157 130 aaKnown RBP1.6□□□□□ -2.15
SEC4YFL005W TIM8P57744 87 aa1.6□□□□□ -2.15
SEC4YFL005W ATP19P81451 68 aa1.6□□□□□ -2.15
SEC4YFL005W YPR114WQ06107 315 aa1.6□□□□□ -2.15
SEC4YFL005W FYV12Q08559 129 aa1.6□□□□□ -2.15
SEC4YFL005W FCF2Q12035 217 aaPredicted RBP1.6□□□□□ -2.15
SEC4YFL005W ATP20Q12233 115 aa1.6□□□□□ -2.15
SEC4YFL005W KTI11Q3E840 82 aa1.6□□□□□ -2.15
SEC4YFL005W MYO2P19524 1574 aaKnown RBP1.59□□□□□ -2.15
SEC4YFL005W FMP49A0A023PZB3 126 aa1.59□□□□□ -2.15
SEC4YFL005W NMT1P14743 455 aa1.59□□□□□ -2.15
SEC4YFL005W GSP2P32836 220 aaKnown RBP1.59□□□□□ -2.15
SEC4YFL005W UTP11P34247 250 aaPredicted RBP1.59□□□□□ -2.15
SEC4YFL005W SHB17P36136 271 aaKnown RBP1.59□□□□□ -2.15
SEC4YFL005W CSH1P38287 376 aa1.59□□□□□ -2.15
SEC4YFL005W YHL042WP38729 150 aa1.59□□□□□ -2.15
SEC4YFL005W HPA3P39979 161 aa1.59□□□□□ -2.15
SEC4YFL005W HYR1P40581 163 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms