RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W PHO85P17157 305 aa6.25□□□□□ -1.41
SHC1YER096W YCL042WP25572 119 aa6.25□□□□□ -1.41
SHC1YER096W NTF2P33331 125 aaKnown RBP6.25□□□□□ -1.41
SHC1YER096W TRS20P38334 175 aa6.25□□□□□ -1.41
SHC1YER096W PET100P38958 111 aa6.25□□□□□ -1.41
SHC1YER096W NOP16P40007 231 aaKnown RBP6.25□□□□□ -1.41
SHC1YER096W POG1P40473 351 aa6.25□□□□□ -1.41
SHC1YER096W RTS2P40962 232 aa6.25□□□□□ -1.41
SHC1YER096W CAF40P53829 373 aa6.25□□□□□ -1.41
SHC1YER096W RAD28Q12021 506 aa6.25□□□□□ -1.41
SHC1YER096W RKI1Q12189 258 aa6.25□□□□□ -1.41
SHC1YER096W RPB9P27999 122 aa6.24□□□□□ -1.41
SHC1YER096W MRPL38P35996 138 aaPredicted RBP6.24□□□□□ -1.41
SHC1YER096W CSH1P38287 376 aa6.24□□□□□ -1.41
SHC1YER096W YFL054CP43549 646 aa6.24□□□□□ -1.41
SHC1YER096W BNA1P47096 177 aa6.24□□□□□ -1.41
SHC1YER096W YAP1802P53309 568 aa6.24□□□□□ -1.41
SHC1YER096W YML108WQ03759 105 aa6.24□□□□□ -1.41
SHC1YER096W CDC7P06243 507 aa6.23□□□□□ -1.41
SHC1YER096W FPR2P32472 135 aa6.23□□□□□ -1.41
SHC1YER096W ALK2P32789 676 aaPredicted RBP6.23□□□□□ -1.41
SHC1YER096W AVT5P38176 459 aa6.23□□□□□ -1.41
SHC1YER096W CDS1P38221 457 aa6.23□□□□□ -1.41
SHC1YER096W GLE2P40066 365 aa6.23□□□□□ -1.41
SHC1YER096W PHS1P40857 217 aa6.23□□□□□ -1.41
SHC1YER096W ILV5P06168 395 aaKnown RBP6.22□□□□□ -1.41
SHC1YER096W RPS2P25443 254 aaKnown RBP6.22□□□□□ -1.41
SHC1YER096W YKL069WP36088 180 aa6.22□□□□□ -1.41
SHC1YER096W LSM2P38203 95 aaKnown RBP6.22□□□□□ -1.41
SHC1YER096W DFR1P07807 211 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
SHC1YER096W ATG8P38182 117 aaRIP-Chip data6.21□□□□□ -1.42not detected
SHC1YER096W IMD2P38697 523 aaKnown RBP6.21□□□□□ -1.42
SHC1YER096W DOG2P38773 246 aa6.21□□□□□ -1.42
SHC1YER096W DOG1P38774 246 aa6.21□□□□□ -1.42
SHC1YER096W YJL027CP47063 138 aaPredicted RBP6.21□□□□□ -1.42
SHC1YER096W HHO1P53551 258 aa6.21□□□□□ -1.42
SHC1YER096W ATC1Q04005 294 aa6.21□□□□□ -1.42
SHC1YER096W YHR213WP0CI67 198 aa6.2□□□□□ -1.42
SHC1YER096W COQ3P27680 312 aa6.2□□□□□ -1.42
SHC1YER096W LAC1P28496 418 aa6.2□□□□□ -1.42
SHC1YER096W SUA7P29055 345 aaPredicted RBP6.2□□□□□ -1.42
SHC1YER096W SNU13P39990 126 aaKnown RBP6.2□□□□□ -1.42
SHC1YER096W SAS2P40963 338 aa6.2□□□□□ -1.42
SHC1YER096W VMA21P41806 77 aa6.2□□□□□ -1.42
SHC1YER096W HIT1P46973 164 aa6.2□□□□□ -1.42
SHC1YER096W HST4P53688 370 aa6.2□□□□□ -1.42
SHC1YER096W LOA1Q06508 300 aa6.2□□□□□ -1.42
SHC1YER096W LDS2Q08218 356 aa6.2□□□□□ -1.42
SHC1YER096W AYT1Q12226 474 aa6.2□□□□□ -1.42
SHC1YER096W PET494P07390 489 aaPredicted RBP6.2□□□□□ -1.42
SHC1YER096W INO2P26798 304 aa6.2□□□□□ -1.42
SHC1YER096W POP5P28005 173 aa6.2□□□□□ -1.42
SHC1YER096W RRT1P38192 103 aa6.2□□□□□ -1.42
SHC1YER096W HUA1P40325 198 aa6.2□□□□□ -1.42
SHC1YER096W YIL163CP40448 117 aa6.2□□□□□ -1.42
SHC1YER096W DAN1P47178 298 aa6.2□□□□□ -1.42
SHC1YER096W TIM21P53220 239 aa6.2□□□□□ -1.42
SHC1YER096W SWT21P53873 357 aaPredicted RBP6.2□□□□□ -1.42
SHC1YER096W YPL108WQ02872 168 aaPredicted RBP6.2□□□□□ -1.42
SHC1YER096W SRL1Q08673 210 aa6.2□□□□□ -1.42
SHC1YER096W FIT2Q08906 153 aa6.2□□□□□ -1.42
SHC1YER096W RNA15P25299 296 aaPredicted RBP6.19□□□□□ -1.42
SHC1YER096W YCR041WP37265 110 aa6.19□□□□□ -1.42
SHC1YER096W SFT2P38166 215 aa6.19□□□□□ -1.42
SHC1YER096W NSE4P43124 402 aa6.19□□□□□ -1.42
SHC1YER096W IMP2P46972 177 aa6.19□□□□□ -1.42
SHC1YER096W OCA2P53949 197 aa6.19□□□□□ -1.42
SHC1YER096W YMR181CQ03231 154 aa6.19□□□□□ -1.42
SHC1YER096W STP4Q07351 490 aa6.19□□□□□ -1.42
SHC1YER096W RPL15AP05748 204 aaKnown RBP6.18□□□□□ -1.42
SHC1YER096W SEC59P20048 519 aa6.18□□□□□ -1.42
SHC1YER096W AFR1P33304 620 aa6.18□□□□□ -1.42
SHC1YER096W PHD1P36093 366 aa6.18□□□□□ -1.42
SHC1YER096W YBR090CP38253 122 aa6.18□□□□□ -1.42
SHC1YER096W YGR219WP53307 113 aa6.18□□□□□ -1.42
SHC1YER096W RPL15BP54780 204 aaPredicted RBP6.18□□□□□ -1.42
SHC1YER096W RAV2Q03956 351 aa6.18□□□□□ -1.42
SHC1YER096W LRS4Q04087 347 aaKnown RBP6.18□□□□□ -1.42
SHC1YER096W YLR118CQ12354 227 aa6.18□□□□□ -1.42
SHC1YER096W ADH3P07246 375 aaKnown RBP6.17□□□□□ -1.42
SHC1YER096W RPB3P16370 318 aaKnown RBP6.17□□□□□ -1.42
SHC1YER096W MRPL4P36517 319 aa6.17□□□□□ -1.42
SHC1YER096W SDH4P37298 181 aa6.17□□□□□ -1.42
SHC1YER096W PRS4P38063 326 aaPredicted RBP6.17□□□□□ -1.42
SHC1YER096W MRPS9P38120 278 aa6.17□□□□□ -1.42
SHC1YER096W YER188WP40103 239 aa6.17□□□□□ -1.42
SHC1YER096W PGD1P40356 397 aa6.17□□□□□ -1.42
SHC1YER096W YNR071CP53757 342 aa6.17□□□□□ -1.42
SHC1YER096W CCW14O13547 238 aa6.16□□□□□ -1.42
SHC1YER096W RPS22AP0C0W1 130 aaKnown RBP6.16□□□□□ -1.42
SHC1YER096W FEN2P25621 512 aaKnown RBP6.16□□□□□ -1.42
SHC1YER096W YBR013CP38215 129 aa6.16□□□□□ -1.42
SHC1YER096W TIM18Q08749 192 aa6.16□□□□□ -1.42
SHC1YER096W CYC3P06182 269 aa6.15□□□□□ -1.42
SHC1YER096W HMX1P32339 317 aa6.15□□□□□ -1.42
SHC1YER096W NNK1P36003 928 aa6.15□□□□□ -1.42
SHC1YER096W FIP1P45976 327 aa6.15□□□□□ -1.42
SHC1YER096W VPS55P47111 140 aa6.15□□□□□ -1.42
SHC1YER096W YGR026WP53217 278 aa6.15□□□□□ -1.42
SHC1YER096W CPD1P53314 239 aa6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms