RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C ACC1Q00955 2233 aaKnown RBP1.34□□□□□ -2.2
VAB2YEL005C QCR2P07257 368 aa1.33□□□□□ -2.2
VAB2YEL005C AQY2P0CD90 149 aa1.33□□□□□ -2.2
VAB2YEL005C SRP102P36057 244 aaPredicted RBP1.33□□□□□ -2.2
VAB2YEL005C YEL008WP40001 126 aa1.33□□□□□ -2.2
VAB2YEL005C MET31Q03081 177 aa1.33□□□□□ -2.2
VAB2YEL005C YDR476CQ03362 224 aa1.33□□□□□ -2.2
VAB2YEL005C THI74Q04083 370 aa1.33□□□□□ -2.2
VAB2YEL005C RIM9Q04734 239 aa1.33□□□□□ -2.2
VAB2YEL005C PST2Q12335 198 aaKnown RBP1.33□□□□□ -2.2
VAB2YEL005C ETR1P38071 380 aa1.32□□□□□ -2.2
VAB2YEL005C YER121WP40076 114 aa1.32□□□□□ -2.2
VAB2YEL005C YDR391CQ04170 232 aa1.32□□□□□ -2.2
VAB2YEL005C RDI1Q12434 202 aa1.32□□□□□ -2.2
VAB2YEL005C MRPL15P36523 253 aa1.31□□□□□ -2.2
VAB2YEL005C YBR242WP38331 238 aa1.31□□□□□ -2.2
VAB2YEL005C YGL101WP53144 215 aa1.31□□□□□ -2.2
VAB2YEL005C LIP1Q03579 150 aa1.31□□□□□ -2.2
VAB2YEL005C AHT1P29589 182 aa1.3□□□□□ -2.2
VAB2YEL005C CPR5P35176 225 aa1.3□□□□□ -2.2
VAB2YEL005C YEL028WP39989 153 aa1.3□□□□□ -2.2
VAB2YEL005C ELP6Q04868 273 aa1.3□□□□□ -2.2
VAB2YEL005C SPS2P08459 502 aa1.29□□□□□ -2.2
VAB2YEL005C PTC1P35182 281 aa1.29□□□□□ -2.2
VAB2YEL005C CSH1P38287 376 aa1.29□□□□□ -2.2
VAB2YEL005C AME1P38313 324 aa1.29□□□□□ -2.2
VAB2YEL005C HUA1P40325 198 aa1.29□□□□□ -2.2
VAB2YEL005C YGR269WP40326 108 aa1.29□□□□□ -2.2
VAB2YEL005C LSM3P57743 89 aaKnown RBP1.29□□□□□ -2.2
VAB2YEL005C YPD1Q07688 167 aa1.29□□□□□ -2.2
VAB2YEL005C ATG10Q07879 167 aa1.29□□□□□ -2.2
VAB2YEL005C UIP4Q08926 304 aa1.29□□□□□ -2.2
VAB2YEL005C YDL157CQ12082 118 aa1.29□□□□□ -2.2
VAB2YEL005C TAR1Q8TGM6 124 aa1.29□□□□□ -2.2
VAB2YEL005C ATP5P09457 212 aa1.28□□□□□ -2.2
VAB2YEL005C DLS1P40366 167 aa1.28□□□□□ -2.2
VAB2YEL005C RPL37AP49166 88 aaKnown RBP1.28□□□□□ -2.2
VAB2YEL005C NSL1Q12143 216 aa1.28□□□□□ -2.2
VAB2YEL005C DUR1,2P32528 1835 aaKnown RBP1.27□□□□□ -2.21
VAB2YEL005C RPS25BP0C0T4 108 aaKnown RBP1.27□□□□□ -2.21
VAB2YEL005C UBI4P0CG63 381 aaKnown RBP1.27□□□□□ -2.21
VAB2YEL005C PBI2P0CT04 75 aaKnown RBP1.27□□□□□ -2.21
VAB2YEL005C PRE1P22141 198 aaKnown RBP1.27□□□□□ -2.21
VAB2YEL005C YNR064CP53750 290 aa1.27□□□□□ -2.21
VAB2YEL005C YPR203WQ08994 102 aa1.27□□□□□ -2.21
VAB2YEL005C RPS25AQ3E792 108 aaPredicted RBP1.27□□□□□ -2.21
VAB2YEL005C APQ12P40532 138 aa1.26□□□□□ -2.21
VAB2YEL005C YGL230CP53074 147 aa1.26□□□□□ -2.21
VAB2YEL005C FIT1Q04433 528 aa1.26□□□□□ -2.21
VAB2YEL005C YLR046CQ12253 270 aa1.26□□□□□ -2.21
VAB2YEL005C EFG1Q3E705 233 aaKnown RBP1.26□□□□□ -2.21
VAB2YEL005C RPS28BP0C0X0 67 aaKnown RBP1.25□□□□□ -2.21
VAB2YEL005C INO4P13902 151 aa1.25□□□□□ -2.21
VAB2YEL005C RPL30P14120 105 aaKnown RBP1.25□□□□□ -2.21
VAB2YEL005C BUB2P26448 306 aaPredicted RBP1.25□□□□□ -2.21
VAB2YEL005C YPT31P38555 223 aaKnown RBP1.25□□□□□ -2.21
VAB2YEL005C HTD2P38790 280 aaKnown RBP1.25□□□□□ -2.21
VAB2YEL005C GEP7P53171 287 aa1.25□□□□□ -2.21
VAB2YEL005C YDR102CQ03864 110 aa1.25□□□□□ -2.21
VAB2YEL005C YPR114WQ06107 315 aa1.25□□□□□ -2.21
VAB2YEL005C RPS28AQ3E7X9 67 aaPredicted RBP1.25□□□□□ -2.21
VAB2YEL005C DER1P38307 211 aa1.24□□□□□ -2.21
VAB2YEL005C CIN5P40917 295 aa1.24□□□□□ -2.21
VAB2YEL005C DCV1P43595 202 aa1.24□□□□□ -2.21
VAB2YEL005C APS3P47064 194 aa1.24□□□□□ -2.21
VAB2YEL005C ORM1P53224 222 aa1.24□□□□□ -2.21
VAB2YEL005C ADE6P38972 1358 aaKnown RBP1.23□□□□□ -2.21
VAB2YEL005C PEX34P25584 144 aa1.23□□□□□ -2.21
VAB2YEL005C SHB17P36136 271 aaKnown RBP1.23□□□□□ -2.21
VAB2YEL005C YKR070WP36151 352 aaKnown RBP1.23□□□□□ -2.21
VAB2YEL005C SLM6P38343 150 aa1.23□□□□□ -2.21
VAB2YEL005C CCC1P47818 322 aa1.23□□□□□ -2.21
VAB2YEL005C KIN28P06242 306 aa1.22□□□□□ -2.21
VAB2YEL005C FIG1P38224 298 aa1.22□□□□□ -2.21
VAB2YEL005C YHL037CP38733 133 aa1.22□□□□□ -2.21
VAB2YEL005C YIL102CP40488 101 aa1.22□□□□□ -2.21
VAB2YEL005C GLC8P41818 229 aa1.22□□□□□ -2.21
VAB2YEL005C YFL051CP43552 160 aa1.22□□□□□ -2.21
VAB2YEL005C YJR015WP47090 510 aa1.22□□□□□ -2.21
VAB2YEL005C SPA2P23201 1466 aaKnown RBP1.22□□□□□ -2.21
VAB2YEL005C SPT14P32363 452 aa1.21□□□□□ -2.22
VAB2YEL005C ARC19P33204 171 aaKnown RBP1.21□□□□□ -2.22
VAB2YEL005C ATP19P81451 68 aa1.21□□□□□ -2.22
VAB2YEL005C LCL2Q08045 131 aa1.21□□□□□ -2.22
VAB2YEL005C YPR202WQ08993 238 aa1.21□□□□□ -2.22
VAB2YEL005C SLH1P53327 1967 aaKnown RBP1.2□□□□□ -2.22
VAB2YEL005C ECM31P38122 312 aa1.2□□□□□ -2.22
VAB2YEL005C YAR064WP39563 99 aa1.2□□□□□ -2.22
VAB2YEL005C YER181CP40097 107 aa1.2□□□□□ -2.22
VAB2YEL005C FIP1P45976 327 aa1.2□□□□□ -2.22
VAB2YEL005C YGL193CP53097 103 aa1.2□□□□□ -2.22
VAB2YEL005C YDC1Q02896 317 aa1.2□□□□□ -2.22
VAB2YEL005C NMA1Q06178 401 aaKnown RBP1.2□□□□□ -2.22
VAB2YEL005C RRT7Q07829 113 aa1.2□□□□□ -2.22
VAB2YEL005C TAF2P23255 1407 aa1.2□□□□□ -2.22
VAB2YEL005C RME1P32338 300 aaKnown RBP1.19□□□□□ -2.22
VAB2YEL005C RPL37BP51402 88 aaKnown RBP1.19□□□□□ -2.22
VAB2YEL005C FMN1Q03778 218 aa1.19□□□□□ -2.22
VAB2YEL005C AVO2Q04749 426 aa1.19□□□□□ -2.22
VAB2YEL005C KEI1Q06346 221 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms