RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	YER134C	P40081	178 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	DLS1	P40366	167 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	YFL019C	P43576	117 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	DYN2	Q02647	92 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	YLR412C-A	Q3E742	68 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	RIB3	Q99258	208 aa		3.8	□□□□□ -1.8
LCB2	YDR062W	NHP6A	P11632	93 aa	Known RBP	3.79	□□□□□ -1.8
LCB2	YDR062W	MRPL17	P36528	281 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	MRPS9	P38120	278 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	YBR285W	P38354	144 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	FCY21	P40039	528 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	PHB1	P40961	287 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	SMD3	P43321	101 aa	Known RBP	3.79	□□□□□ -1.8
LCB2	YDR062W	BUD13	P46947	266 aa	Predicted RBP	3.79	□□□□□ -1.8
LCB2	YDR062W	AIF1	P52923	378 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	YMR320W	Q04897	101 aa		3.79	□□□□□ -1.8
LCB2	YDR062W	PST2	Q12335	198 aa	Known RBP	3.79	□□□□□ -1.8
LCB2	YDR062W	NAT3	Q06504	195 aa		3.78	□□□□□ -1.8
LCB2	YDR062W	YLR422W	Q06409	1932 aa		3.78	□□□□□ -1.8
LCB2	YDR062W	TOR1	P35169	2470 aa		3.78	□□□□□ -1.8
LCB2	YDR062W	SUA7	P29055	345 aa	Predicted RBP	3.78	□□□□□ -1.81
LCB2	YDR062W	PAN3	P36102	679 aa	Predicted RBP	3.78	□□□□□ -1.81
LCB2	YDR062W	VMA10	P48836	114 aa	Known RBP	3.78	□□□□□ -1.81
LCB2	YDR062W	YDR274C	P87283	123 aa		3.78	□□□□□ -1.81
LCB2	YDR062W	ODC2	Q99297	307 aa		3.78	□□□□□ -1.81
LCB2	YDR062W	CPA1	P07258	411 aa	Known RBP	3.77	□□□□□ -1.81
LCB2	YDR062W	YKR032W	P36127	104 aa		3.77	□□□□□ -1.81
LCB2	YDR062W	PRS3	P38689	320 aa	Known RBP	3.77	□□□□□ -1.81
LCB2	YDR062W	VTC1	P40046	129 aa	RIP-Chip data	3.77	□□□□□ -1.81	not detected
LCB2	YDR062W	UBC7	Q02159	165 aa		3.77	□□□□□ -1.81
LCB2	YDR062W	HRD1	Q08109	551 aa		3.77	□□□□□ -1.81
LCB2	YDR062W	YAR023C	D6VPM8	179 aa		3.76	□□□□□ -1.81
LCB2	YDR062W	YPT53	P36019	220 aa		3.76	□□□□□ -1.81
LCB2	YDR062W	YPL073C	P40323	161 aa		3.76	□□□□□ -1.81
LCB2	YDR062W	GVP36	P40531	326 aa	Known RBP	3.76	□□□□□ -1.81
LCB2	YDR062W	RCF2	P53721	224 aa		3.76	□□□□□ -1.81
LCB2	YDR062W	FAB1	P34756	2278 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	GAA1	P39012	614 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	CCC1	P47818	322 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	MSW1	P04803	379 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	YHL026C	P38740	315 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	MOB1	P40484	314 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	YFR054C	P43622	192 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	VPS71	Q03433	280 aa		3.75	□□□□□ -1.81
LCB2	YDR062W	SPG3	Q04398	127 aa	Predicted RBP	3.75	□□□□□ -1.81
LCB2	YDR062W	SCL1	P21243	252 aa	Known RBP	3.74	□□□□□ -1.81
LCB2	YDR062W	MID2	P36027	376 aa		3.74	□□□□□ -1.81
LCB2	YDR062W	YNL200C	P40165	246 aa	Known RBP	3.74	□□□□□ -1.81
LCB2	YDR062W	TIM13	P53299	105 aa		3.74	□□□□□ -1.81
LCB2	YDR062W	CAB4	P53332	305 aa		3.74	□□□□□ -1.81
LCB2	YDR062W	ATP5	P09457	212 aa		3.73	□□□□□ -1.81
LCB2	YDR062W	CPR5	P35176	225 aa		3.73	□□□□□ -1.81
LCB2	YDR062W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
LCB2	YDR062W	FIP1	P45976	327 aa		3.73	□□□□□ -1.81
LCB2	YDR062W	COF1	Q03048	143 aa	Known RBP	3.73	□□□□□ -1.81
LCB2	YDR062W	YMR099C	Q03161	297 aa	Known RBP	3.73	□□□□□ -1.81
LCB2	YDR062W	YOR214C	Q12282	236 aa		3.73	□□□□□ -1.81
LCB2	YDR062W	GLR1	P41921	483 aa	Known RBP	3.72	□□□□□ -1.81
LCB2	YDR062W	FMN1	Q03778	218 aa		3.72	□□□□□ -1.81
LCB2	YDR062W	RPC19	P28000	142 aa	Known RBP	3.71	□□□□□ -1.81
LCB2	YDR062W	PIR5	P46999	287 aa		3.71	□□□□□ -1.81
LCB2	YDR062W	TIM8	P57744	87 aa		3.71	□□□□□ -1.81
LCB2	YDR062W	HAP2	P06774	265 aa		3.71	□□□□□ -1.82
LCB2	YDR062W	UMP1	P38293	148 aa		3.71	□□□□□ -1.82
LCB2	YDR062W	FYV4	P38783	130 aa	Predicted RBP	3.71	□□□□□ -1.82
LCB2	YDR062W	PGD1	P40356	397 aa		3.71	□□□□□ -1.82
LCB2	YDR062W	YIL059C	P40520	121 aa		3.71	□□□□□ -1.82
LCB2	YDR062W	ERJ5	P43613	295 aa	Predicted RBP	3.71	□□□□□ -1.82
LCB2	YDR062W	YDR366C	P87287	132 aa		3.71	□□□□□ -1.82
LCB2	YDR062W	ATP14	Q12349	124 aa		3.71	□□□□□ -1.82
LCB2	YDR062W	POR1	P04840	283 aa	Known RBP	3.7	□□□□□ -1.82
LCB2	YDR062W	RSA4	P25382	515 aa	Known RBP	3.7	□□□□□ -1.82
LCB2	YDR062W	SNC2	P33328	115 aa		3.7	□□□□□ -1.82
LCB2	YDR062W	HHO1	P53551	258 aa		3.7	□□□□□ -1.82
LCB2	YDR062W	YDR114C	Q04597	100 aa		3.7	□□□□□ -1.82
LCB2	YDR062W	YDR278C	Q05612	105 aa		3.7	□□□□□ -1.82
LCB2	YDR062W	YPD1	Q07688	167 aa		3.7	□□□□□ -1.82
LCB2	YDR062W	WIP1	Q2V2P8	89 aa		3.7	□□□□□ -1.82
LCB2	YDR062W	NSP1	P14907	823 aa	Known RBP	3.69	□□□□□ -1.82
LCB2	YDR062W	YER181C	P40097	107 aa		3.69	□□□□□ -1.82
LCB2	YDR062W	YIR035C	P40579	254 aa		3.69	□□□□□ -1.82
LCB2	YDR062W	GLC8	P41818	229 aa		3.69	□□□□□ -1.82
LCB2	YDR062W	DIG2	Q03373	323 aa	Known RBP	3.69	□□□□□ -1.82
LCB2	YDR062W	MRPS8	Q03799	155 aa		3.69	□□□□□ -1.82
LCB2	YDR062W	RPS23A	P0CX29	145 aa	Known RBP	3.68	□□□□□ -1.82
LCB2	YDR062W	RPS23B	P0CX30	145 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	YHR180W	P38868	163 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	YGR039W	P53225	103 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	NEJ1	Q06148	342 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	ATO3	Q12359	275 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	TIR1	P10863	254 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	NSA2	P40078	261 aa	Known RBP	3.68	□□□□□ -1.82
LCB2	YDR062W	GAL83	Q04739	417 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	FYV12	Q08559	129 aa		3.68	□□□□□ -1.82
LCB2	YDR062W	SCM4	P32564	187 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	PTC1	P35182	281 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	YBR220C	P38318	560 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	SBH1	P52870	82 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	DOC1	P53068	250 aa		3.67	□□□□□ -1.82
LCB2	YDR062W	YGL193C	P53097	103 aa		3.67	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms