RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	BEM2	P39960	2167 aa	Known RBP	3.02	□□□□□ -1.93
RPN5	YDL147W	YGL010W	P25338	174 aa		3.02	□□□□□ -1.93
RPN5	YDL147W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
RPN5	YDL147W	ALB1	P47019	175 aa	Predicted RBP	3.02	□□□□□ -1.93
RPN5	YDL147W	RRP17	Q04031	235 aa	Predicted RBP	3.02	□□□□□ -1.93
RPN5	YDL147W	FIT2	Q08906	153 aa		3.02	□□□□□ -1.93
RPN5	YDL147W	ATG41	Q12048	136 aa		3.02	□□□□□ -1.93
RPN5	YDL147W	YOR381W-A	Q3E804	55 aa		3.02	□□□□□ -1.93
RPN5	YDL147W	HTD2	P38790	280 aa	Known RBP	3.01	□□□□□ -1.93
RPN5	YDL147W	YGL193C	P53097	103 aa		3.01	□□□□□ -1.93
RPN5	YDL147W	RCE1	Q03530	315 aa		3.01	□□□□□ -1.93
RPN5	YDL147W	YPD1	Q07688	167 aa		3.01	□□□□□ -1.93
RPN5	YDL147W	SOK1	P40317	901 aa		3	□□□□□ -1.93
RPN5	YDL147W	NSE4	P43124	402 aa		3	□□□□□ -1.93
RPN5	YDL147W	LIP1	Q03579	150 aa		3	□□□□□ -1.93
RPN5	YDL147W	UPS2	P35200	230 aa		2.99	□□□□□ -1.93
RPN5	YDL147W	YHP1	Q04116	353 aa		2.99	□□□□□ -1.93
RPN5	YDL147W	UPS1	Q05776	175 aa		2.99	□□□□□ -1.93
RPN5	YDL147W	FLX1	P40464	311 aa		2.98	□□□□□ -1.93
RPN5	YDL147W	MOB1	P40484	314 aa		2.98	□□□□□ -1.93
RPN5	YDL147W	FIP1	P45976	327 aa		2.98	□□□□□ -1.93
RPN5	YDL147W	CCC1	P47818	322 aa		2.98	□□□□□ -1.93
RPN5	YDL147W	YDC1	Q02896	317 aa		2.98	□□□□□ -1.93
RPN5	YDL147W	STF2	P16965	84 aa		2.97	□□□□□ -1.93
RPN5	YDL147W	MAK31	P23059	88 aa		2.97	□□□□□ -1.93
RPN5	YDL147W	HPA3	P39979	161 aa		2.97	□□□□□ -1.93
RPN5	YDL147W	PAC10	P48363	199 aa		2.97	□□□□□ -1.93
RPN5	YDL147W	UIP4	Q08926	304 aa		2.97	□□□□□ -1.93
RPN5	YDL147W	UBC8	P28263	218 aa		2.96	□□□□□ -1.93
RPN5	YDL147W	RPB7	P34087	171 aa		2.96	□□□□□ -1.93
RPN5	YDL147W	HYR1	P40581	163 aa	Known RBP	2.96	□□□□□ -1.93
RPN5	YDL147W	YML079W	Q03629	201 aa		2.96	□□□□□ -1.93
RPN5	YDL147W	PST2	Q12335	198 aa	Known RBP	2.96	□□□□□ -1.93
RPN5	YDL147W	YNL146C-A	Q3E7Z1	64 aa		2.96	□□□□□ -1.93
RPN5	YDL147W	YOR1	P53049	1477 aa		2.96	□□□□□ -1.94
RPN5	YDL147W	FPR1	P20081	114 aa	Known RBP	2.95	□□□□□ -1.94
RPN5	YDL147W	IPI1	P38803	334 aa	Predicted RBP	2.95	□□□□□ -1.94
RPN5	YDL147W	YJR015W	P47090	510 aa		2.95	□□□□□ -1.94
RPN5	YDL147W	YNR064C	P53750	290 aa		2.95	□□□□□ -1.94
RPN5	YDL147W	ATG10	Q07879	167 aa		2.95	□□□□□ -1.94
RPN5	YDL147W	YMR030W-A	Q3E760	96 aa		2.95	□□□□□ -1.94
RPN5	YDL147W	YER181C	P40097	107 aa		2.94	□□□□□ -1.94
RPN5	YDL147W	CCS1	P40202	249 aa	Known RBP	2.94	□□□□□ -1.94
RPN5	YDL147W	ACC1	Q00955	2233 aa	Known RBP	2.94	□□□□□ -1.94
RPN5	YDL147W	CWC27	Q02770	301 aa		2.94	□□□□□ -1.94
RPN5	YDL147W	YDR102C	Q03864	110 aa		2.94	□□□□□ -1.94
RPN5	YDL147W	YAE1	P47118	141 aa	Predicted RBP	2.93	□□□□□ -1.94
RPN5	YDL147W	MPM1	P40364	252 aa		2.93	□□□□□ -1.94
RPN5	YDL147W	YBL010C	P32788	280 aa		2.92	□□□□□ -1.94
RPN5	YDL147W	YPT31	P38555	223 aa	Known RBP	2.92	□□□□□ -1.94
RPN5	YDL147W	MET31	Q03081	177 aa		2.92	□□□□□ -1.94
RPN5	YDL147W	UBR2	Q07963	1872 aa		2.91	□□□□□ -1.94
RPN5	YDL147W	SPS2	P08459	502 aa		2.91	□□□□□ -1.94
RPN5	YDL147W	YEL067C	P39978	195 aa		2.91	□□□□□ -1.94
RPN5	YDL147W	YGR269W	P40326	108 aa		2.91	□□□□□ -1.94
RPN5	YDL147W	YPR114W	Q06107	315 aa		2.91	□□□□□ -1.94
RPN5	YDL147W	YDL157C	Q12082	118 aa		2.91	□□□□□ -1.94
RPN5	YDL147W	DUR1,2	P32528	1835 aa	Known RBP	2.9	□□□□□ -1.94
RPN5	YDL147W	YHL042W	P38729	150 aa		2.9	□□□□□ -1.95
RPN5	YDL147W	MZM1	Q03429	123 aa	Predicted RBP	2.9	□□□□□ -1.95
RPN5	YDL147W	RRT7	Q07829	113 aa		2.9	□□□□□ -1.95
RPN5	YDL147W	SEN2	P16658	377 aa		2.89	□□□□□ -1.95
RPN5	YDL147W	RBL2	P48606	106 aa	Known RBP	2.89	□□□□□ -1.95
RPN5	YDL147W	SPA2	P23201	1466 aa	Known RBP	2.88	□□□□□ -1.95
RPN5	YDL147W	PHO13	P19881	312 aa		2.88	□□□□□ -1.95
RPN5	YDL147W	MRPL24	P36525	258 aa	Predicted RBP	2.88	□□□□□ -1.95
RPN5	YDL147W	YJL218W	P40892	196 aa	Known RBP	2.88	□□□□□ -1.95
RPN5	YDL147W	YDR366C	P87287	132 aa		2.88	□□□□□ -1.95
RPN5	YDL147W	ELP6	Q04868	273 aa		2.88	□□□□□ -1.95
RPN5	YDL147W	UBC7	Q02159	165 aa		2.87	□□□□□ -1.95
RPN5	YDL147W	YMR252C	Q04814	134 aa		2.87	□□□□□ -1.95
RPN5	YDL147W	INO4	P13902	151 aa		2.86	□□□□□ -1.95
RPN5	YDL147W	CIN5	P40917	295 aa		2.86	□□□□□ -1.95
RPN5	YDL147W	YGR201C	P42936	225 aa		2.86	□□□□□ -1.95
RPN5	YDL147W	YMR320W	Q04897	101 aa		2.85	□□□□□ -1.95
RPN5	YDL147W	ADE6	P38972	1358 aa	Known RBP	2.85	□□□□□ -1.95
RPN5	YDL147W	RPS25B	P0C0T4	108 aa	Known RBP	2.84	□□□□□ -1.96
RPN5	YDL147W	MRS4	P23500	304 aa		2.84	□□□□□ -1.96
RPN5	YDL147W	SPT14	P32363	452 aa		2.84	□□□□□ -1.96
RPN5	YDL147W	GPI2	P46961	280 aa		2.84	□□□□□ -1.96
RPN5	YDL147W	GEP7	P53171	287 aa		2.84	□□□□□ -1.96
RPN5	YDL147W	ATP19	P81451	68 aa		2.84	□□□□□ -1.96
RPN5	YDL147W	RPS25A	Q3E792	108 aa	Predicted RBP	2.84	□□□□□ -1.96
RPN5	YDL147W	ETR1	P38071	380 aa		2.83	□□□□□ -1.96
RPN5	YDL147W	HHO1	P53551	258 aa		2.83	□□□□□ -1.96
RPN5	YDL147W	YDL241W	Q07738	123 aa		2.83	□□□□□ -1.96
RPN5	YDL147W	TAF2	P23255	1407 aa		2.82	□□□□□ -1.96
RPN5	YDL147W	HSP12	P22943	109 aa	Known RBP	2.82	□□□□□ -1.96
RPN5	YDL147W	YEL008W	P40001	126 aa		2.82	□□□□□ -1.96
RPN5	YDL147W	GIM4	P40005	111 aa	Known RBP	2.82	□□□□□ -1.96
RPN5	YDL147W	COF1	Q03048	143 aa	Known RBP	2.82	□□□□□ -1.96
RPN5	YDL147W	EST3	Q03096	181 aa		2.82	□□□□□ -1.96
RPN5	YDL147W	RPC19	P28000	142 aa	Known RBP	2.81	□□□□□ -1.96
RPN5	YDL147W	CYC2	P38909	366 aa		2.81	□□□□□ -1.96
RPN5	YDL147W	YGL204C	P53089	101 aa		2.81	□□□□□ -1.96
RPN5	YDL147W	YGR039W	P53225	103 aa		2.81	□□□□□ -1.96
RPN5	YDL147W	SPC2	Q04969	178 aa		2.81	□□□□□ -1.96
RPN5	YDL147W	RFU1	Q08003	200 aa		2.81	□□□□□ -1.96
RPN5	YDL147W	UBR1	P19812	1950 aa		2.81	□□□□□ -1.96
RPN5	YDL147W	SRP21	P32342	167 aa		2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms