RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C IMG2P25642 146 aaPredicted RBP0.93□□□□□ -2.26
VAM6YDL077C CNE1P27825 502 aa0.93□□□□□ -2.26
VAM6YDL077C AHT1P29589 182 aa0.93□□□□□ -2.26
VAM6YDL077C YPS1P32329 569 aa0.93□□□□□ -2.26
VAM6YDL077C QRI5P32344 111 aa0.93□□□□□ -2.26
VAM6YDL077C ERG24P32462 438 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C SKN1P33336 771 aa0.93□□□□□ -2.26
VAM6YDL077C ASK1P35734 292 aa0.93□□□□□ -2.26
VAM6YDL077C GPX1P36014 167 aa0.93□□□□□ -2.26
VAM6YDL077C YNL198CP40166 100 aa0.93□□□□□ -2.26
VAM6YDL077C OST2P46964 130 aa0.93□□□□□ -2.26
VAM6YDL077C UBX6P47049 396 aa0.93□□□□□ -2.26
VAM6YDL077C YJR096WP47137 282 aa0.93□□□□□ -2.26
VAM6YDL077C UBP8P50102 471 aa0.93□□□□□ -2.26
VAM6YDL077C UBC9P50623 157 aaPredicted RBP0.93□□□□□ -2.26
VAM6YDL077C CAB4P53332 305 aa0.93□□□□□ -2.26
VAM6YDL077C VPS71Q03433 280 aa0.93□□□□□ -2.26
VAM6YDL077C FSH2Q05015 223 aa0.93□□□□□ -2.26
VAM6YDL077C YDL218WQ07629 317 aa0.93□□□□□ -2.26
VAM6YDL077C RRT7Q07829 113 aa0.93□□□□□ -2.26
VAM6YDL077C UTP23Q12339 254 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C ATO3Q12359 275 aa0.93□□□□□ -2.26
VAM6YDL077C ERP3Q12403 225 aa0.93□□□□□ -2.26
VAM6YDL077C MPD1Q12404 318 aaKnown RBP0.93□□□□□ -2.26
VAM6YDL077C YLR146W-AQ2V2P1 62 aa0.93□□□□□ -2.26
VAM6YDL077C UBA3Q99344 299 aa0.93□□□□□ -2.26
VAM6YDL077C ECM12O13529 151 aa0.92□□□□□ -2.26
VAM6YDL077C MDM35O60200 86 aa0.92□□□□□ -2.26
VAM6YDL077C COX1P00401 534 aa0.92□□□□□ -2.26
VAM6YDL077C COX5AP00424 153 aa0.92□□□□□ -2.26
VAM6YDL077C Q0255P03881 472 aa0.92□□□□□ -2.26
VAM6YDL077C YKR104WP0CE69 306 aa0.92□□□□□ -2.26
VAM6YDL077C YOL162WP0CF19 215 aa0.92□□□□□ -2.26
VAM6YDL077C RPL35AP0CX84 120 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C RPL35BP0CX85 120 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C NHP2P32495 156 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C MID2P36027 376 aa0.92□□□□□ -2.26
VAM6YDL077C SRX1P36077 127 aa0.92□□□□□ -2.26
VAM6YDL077C YKL070WP36087 169 aa0.92□□□□□ -2.26
VAM6YDL077C SWD2P36104 329 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C MIC12P38341 106 aa0.92□□□□□ -2.26
VAM6YDL077C YHL042WP38729 150 aa0.92□□□□□ -2.26
VAM6YDL077C ANS1P38832 159 aa0.92□□□□□ -2.26
VAM6YDL077C ECM14P38836 430 aa0.92□□□□□ -2.26
VAM6YDL077C YHR210CP38893 341 aa0.92□□□□□ -2.26
VAM6YDL077C FLO5P38894 1075 aa0.92□□□□□ -2.26
VAM6YDL077C PEX22P39718 180 aa0.92□□□□□ -2.26
VAM6YDL077C YER121WP40076 114 aa0.92□□□□□ -2.26
VAM6YDL077C YNL217WP40152 326 aa0.92□□□□□ -2.26
VAM6YDL077C YIL060WP40519 144 aa0.92□□□□□ -2.26
VAM6YDL077C CDC1P40986 491 aa0.92□□□□□ -2.26
VAM6YDL077C TES1P41903 349 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C PAM16P42949 149 aa0.92□□□□□ -2.26
VAM6YDL077C YFL012WP43580 148 aa0.92□□□□□ -2.26
VAM6YDL077C ARP3P47117 449 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C DSK2P48510 373 aa0.92□□□□□ -2.26
VAM6YDL077C MSY1P48527 492 aa0.92□□□□□ -2.26
VAM6YDL077C BXI1P48558 297 aa0.92□□□□□ -2.26
VAM6YDL077C HNT2P49775 206 aa0.92□□□□□ -2.26
VAM6YDL077C CAX4P53223 239 aa0.92□□□□□ -2.26
VAM6YDL077C POP3P53833 195 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C CSL4P53859 292 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C YLR152CP54072 576 aa0.92□□□□□ -2.26
VAM6YDL077C YPL077CQ02831 240 aa0.92□□□□□ -2.26
VAM6YDL077C MRX11Q03079 207 aa0.92□□□□□ -2.26
VAM6YDL077C MIX17Q03667 156 aa0.92□□□□□ -2.26
VAM6YDL077C AIM33Q04516 312 aa0.92□□□□□ -2.26
VAM6YDL077C SEN15Q04675 128 aa0.92□□□□□ -2.26
VAM6YDL077C ARC18Q05933 178 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C HPA2Q06592 156 aa0.92□□□□□ -2.26
VAM6YDL077C IRC25Q07951 179 aa0.92□□□□□ -2.26
VAM6YDL077C TMC1Q08422 150 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C RRS1Q08746 203 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C MRH1Q12117 320 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C USB1Q12208 290 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C YOR097CQ12274 175 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C ERV2Q12284 196 aa0.92□□□□□ -2.26
VAM6YDL077C YPS3Q12303 508 aa0.92□□□□□ -2.26
VAM6YDL077C YPL038W-AQ3E7B4 63 aa0.92□□□□□ -2.26
VAM6YDL077C ENV10Q99382 181 aa0.92□□□□□ -2.26
VAM6YDL077C YER039C-AP0CD97 72 aa0.92□□□□□ -2.26
VAM6YDL077C CTA1P15202 515 aa0.92□□□□□ -2.26
VAM6YDL077C CPT1P17898 393 aa0.92□□□□□ -2.26
VAM6YDL077C ERG4P25340 473 aa0.92□□□□□ -2.26
VAM6YDL077C FUB1P25659 250 aa0.92□□□□□ -2.26
VAM6YDL077C ADK2P26364 225 aa0.92□□□□□ -2.26
VAM6YDL077C SDH3P33421 198 aa0.92□□□□□ -2.26
VAM6YDL077C RPL14AP36105 138 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C SAS2P40963 338 aa0.92□□□□□ -2.26
VAM6YDL077C OST1P41543 476 aaKnown RBP0.92□□□□□ -2.26
VAM6YDL077C SHR5P41912 237 aa0.92□□□□□ -2.26
VAM6YDL077C YFL065CP43539 102 aa0.92□□□□□ -2.26
VAM6YDL077C BRP1P53194 125 aa0.92□□□□□ -2.26
VAM6YDL077C YNL184CP53876 108 aa0.92□□□□□ -2.26
VAM6YDL077C SNP1Q00916 300 aaPredicted RBP0.92□□□□□ -2.26
VAM6YDL077C YDR042CQ03205 200 aa0.92□□□□□ -2.26
VAM6YDL077C NAT3Q06504 195 aa0.92□□□□□ -2.26
VAM6YDL077C RXT3Q07458 294 aa0.92□□□□□ -2.26
VAM6YDL077C YOL073CQ08232 322 aa0.92□□□□□ -2.26
VAM6YDL077C YOR105WQ08504 108 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms