RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W GRH1Q04410 372 aaKnown RBP1.89□□□□□ -2.11
MCD1YDL003W CDD1Q06549 142 aa1.89□□□□□ -2.11
MCD1YDL003W SYM1Q06563 197 aa1.89□□□□□ -2.11
MCD1YDL003W HTL1Q9URQ5 78 aa1.89□□□□□ -2.11
MCD1YDL003W FLO1P32768 1537 aa1.89□□□□□ -2.11
MCD1YDL003W HKR1P41809 1802 aa1.89□□□□□ -2.11
MCD1YDL003W SLH1P53327 1967 aaKnown RBP1.89□□□□□ -2.11
MCD1YDL003W STE7P06784 515 aa1.88□□□□□ -2.11
MCD1YDL003W GLN3P18494 730 aa1.88□□□□□ -2.11
MCD1YDL003W MRS4P23500 304 aa1.88□□□□□ -2.11
MCD1YDL003W SWD2P36104 329 aaPredicted RBP1.88□□□□□ -2.11
MCD1YDL003W SRP14P38985 146 aa1.88□□□□□ -2.11
MCD1YDL003W YAL037WP39728 267 aa1.88□□□□□ -2.11
MCD1YDL003W BTT1P40314 149 aaPredicted RBP1.88□□□□□ -2.11
MCD1YDL003W YFR045WP43617 309 aa1.88□□□□□ -2.11
MCD1YDL003W GON7P46984 123 aa1.88□□□□□ -2.11
MCD1YDL003W GEP7P53171 287 aa1.88□□□□□ -2.11
MCD1YDL003W YGR039WP53225 103 aa1.88□□□□□ -2.11
MCD1YDL003W YIP3P53633 176 aa1.88□□□□□ -2.11
MCD1YDL003W YLR152CP54072 576 aa1.88□□□□□ -2.11
MCD1YDL003W TGL2P54857 326 aa1.88□□□□□ -2.11
MCD1YDL003W BUD25P85052 153 aa1.88□□□□□ -2.11
MCD1YDL003W YPL039WQ03080 316 aa1.88□□□□□ -2.11
MCD1YDL003W HPA2Q06592 156 aa1.88□□□□□ -2.11
MCD1YDL003W PAM18Q07914 168 aa1.88□□□□□ -2.11
MCD1YDL003W UTP23Q12339 254 aaKnown RBP1.88□□□□□ -2.11
MCD1YDL003W YCR024C-BQ3E7Z8 88 aa1.88□□□□□ -2.11
MCD1YDL003W SCS22Q6Q595 175 aa1.88□□□□□ -2.11
MCD1YDL003W ATG40Q99325 256 aa1.88□□□□□ -2.11
MCD1YDL003W RPL12AP0CX53 165 aaKnown RBP1.88□□□□□ -2.11
MCD1YDL003W RPL12BP0CX54 165 aa1.88□□□□□ -2.11
MCD1YDL003W HMRA1P0CY11 126 aa1.88□□□□□ -2.11
MCD1YDL003W SEC11P15367 167 aa1.88□□□□□ -2.11
MCD1YDL003W QCR9P22289 66 aa1.88□□□□□ -2.11
MCD1YDL003W PDE1P22434 369 aa1.88□□□□□ -2.11
MCD1YDL003W CSE2P33308 149 aa1.88□□□□□ -2.11
MCD1YDL003W SGE1P33335 543 aa1.88□□□□□ -2.11
MCD1YDL003W GPX1P36014 167 aa1.88□□□□□ -2.11
MCD1YDL003W YOR062CP36025 268 aa1.88□□□□□ -2.11
MCD1YDL003W TRM7P38238 310 aaKnown RBP1.88□□□□□ -2.11
MCD1YDL003W INM1P38710 295 aa1.88□□□□□ -2.11
MCD1YDL003W TIF34P40217 347 aaKnown RBP1.88□□□□□ -2.11
MCD1YDL003W CYB5P40312 120 aa1.88□□□□□ -2.11
MCD1YDL003W YJL213WP40896 331 aa1.88□□□□□ -2.11
MCD1YDL003W YCH1P42937 148 aa1.88□□□□□ -2.11
MCD1YDL003W CWP2P43497 92 aa1.88□□□□□ -2.11
MCD1YDL003W GPI2P46961 280 aa1.88□□□□□ -2.11
MCD1YDL003W TDA4P47153 279 aa1.88□□□□□ -2.11
MCD1YDL003W YDL186WP48568 277 aa1.88□□□□□ -2.11
MCD1YDL003W YNR048WP53740 393 aa1.88□□□□□ -2.11
MCD1YDL003W ABF2Q02486 183 aa1.88□□□□□ -2.11
MCD1YDL003W RAV2Q03956 351 aa1.88□□□□□ -2.11
MCD1YDL003W YMR082CQ04276 118 aa1.88□□□□□ -2.11
MCD1YDL003W YOL029CQ08187 201 aa1.88□□□□□ -2.11
MCD1YDL003W PRM3Q08931 133 aa1.88□□□□□ -2.11
MCD1YDL003W ATO3Q12359 275 aa1.88□□□□□ -2.11
MCD1YDL003W ECM12O13529 151 aa1.87□□□□□ -2.11
MCD1YDL003W PHO85P17157 305 aa1.87□□□□□ -2.11
MCD1YDL003W CPT1P17898 393 aa1.87□□□□□ -2.11
MCD1YDL003W MDH2P22133 377 aa1.87□□□□□ -2.11
MCD1YDL003W MRPL20P22354 195 aaPredicted RBP1.87□□□□□ -2.11
MCD1YDL003W SCO1P23833 295 aa1.87□□□□□ -2.11
MCD1YDL003W AGA2P32781 87 aa1.87□□□□□ -2.11
MCD1YDL003W ECM15P35195 104 aa1.87□□□□□ -2.11
MCD1YDL003W KKQ8P36004 724 aa1.87□□□□□ -2.11
MCD1YDL003W KRE9P39005 276 aa1.87□□□□□ -2.11
MCD1YDL003W DFG10P40526 253 aa1.87□□□□□ -2.11
MCD1YDL003W YJL028WP47062 111 aa1.87□□□□□ -2.11
MCD1YDL003W YNL234WP53857 426 aa1.87□□□□□ -2.11
MCD1YDL003W MRPL19P53875 158 aa1.87□□□□□ -2.11
MCD1YDL003W YMR178WQ03219 274 aaKnown RBP1.87□□□□□ -2.11
MCD1YDL003W ARC18Q05933 178 aaKnown RBP1.87□□□□□ -2.11
MCD1YDL003W SNT309Q06091 175 aaPredicted RBP1.87□□□□□ -2.11
MCD1YDL003W YOR376WQ08900 122 aa1.87□□□□□ -2.11
MCD1YDL003W FIG2P25653 1609 aa1.87□□□□□ -2.11
MCD1YDL003W MSB2P32334 1306 aa1.86□□□□□ -2.11
MCD1YDL003W SOD1P00445 154 aaKnown RBP1.86□□□□□ -2.11
MCD1YDL003W RPS28BP0C0X0 67 aaKnown RBP1.86□□□□□ -2.11
MCD1YDL003W ERG8P24521 451 aa1.86□□□□□ -2.11
MCD1YDL003W YCR100CP25606 316 aa1.86□□□□□ -2.11
MCD1YDL003W ERV1P27882 189 aa1.86□□□□□ -2.11
MCD1YDL003W PAD1P33751 242 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
MCD1YDL003W APS1P35181 156 aa1.86□□□□□ -2.11
MCD1YDL003W SHB17P36136 271 aaKnown RBP1.86□□□□□ -2.11
MCD1YDL003W YBR090CP38253 122 aa1.86□□□□□ -2.11
MCD1YDL003W ECM34P38728 170 aa1.86□□□□□ -2.11
MCD1YDL003W YHL026CP38740 315 aa1.86□□□□□ -2.11
MCD1YDL003W ECM14P38836 430 aa1.86□□□□□ -2.11
MCD1YDL003W YEL073CP39974 107 aa1.86□□□□□ -2.11
MCD1YDL003W YER181CP40097 107 aa1.86□□□□□ -2.11
MCD1YDL003W CCS1P40202 249 aaKnown RBP1.86□□□□□ -2.11
MCD1YDL003W CAX4P53223 239 aa1.86□□□□□ -2.11
MCD1YDL003W MSO1P53604 210 aaKnown RBP1.86□□□□□ -2.11
MCD1YDL003W SLG1P54867 378 aa1.86□□□□□ -2.11
MCD1YDL003W AIM11P87275 137 aa1.86□□□□□ -2.11
MCD1YDL003W COF1Q03048 143 aaKnown RBP1.86□□□□□ -2.11
MCD1YDL003W BET5Q03630 159 aa1.86□□□□□ -2.11
MCD1YDL003W AIM34Q03673 198 aa1.86□□□□□ -2.11
MCD1YDL003W RSF1Q05043 376 aa1.86□□□□□ -2.11
MCD1YDL003W YPL264CQ08980 353 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms