RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W FRQ1Q06389 190 aa4.46□□□□□ -1.7
SHM1YBR263W BER1Q06688 274 aaKnown RBP4.46□□□□□ -1.7
SHM1YBR263W PBP4Q07362 185 aaKnown RBP4.46□□□□□ -1.7
SHM1YBR263W RKI1Q12189 258 aa4.46□□□□□ -1.7
SHM1YBR263W YHR213W-AQ8TGT4 77 aa4.46□□□□□ -1.7
SHM1YBR263W FCY2P17064 533 aa4.45□□□□□ -1.7
SHM1YBR263W AIM29P36154 155 aa4.45□□□□□ -1.7
SHM1YBR263W DAD2P36162 133 aa4.45□□□□□ -1.7
SHM1YBR263W ASP1P38986 381 aaPredicted RBP4.45□□□□□ -1.7
SHM1YBR263W YEA4P40004 342 aa4.45□□□□□ -1.7
SHM1YBR263W FIP1P45976 327 aa4.45□□□□□ -1.7
SHM1YBR263W UBC11P52492 156 aa4.45□□□□□ -1.7
SHM1YBR263W DUO1P53168 247 aaKnown RBP4.45□□□□□ -1.7
SHM1YBR263W CAF40P53829 373 aa4.45□□□□□ -1.7
SHM1YBR263W YPL080CQ02826 108 aa4.45□□□□□ -1.7
SHM1YBR263W IRC23Q08416 157 aa4.45□□□□□ -1.7
SHM1YBR263W RAD28Q12021 506 aa4.45□□□□□ -1.7
SHM1YBR263W PRR2Q12310 699 aa4.45□□□□□ -1.7
SHM1YBR263W YBR298C-AQ8TGK4 73 aa4.45□□□□□ -1.7
SHM1YBR263W ILV5P06168 395 aaKnown RBP4.44□□□□□ -1.7
SHM1YBR263W RPS25BP0C0T4 108 aaKnown RBP4.44□□□□□ -1.7
SHM1YBR263W YER190C-BP0CX94 160 aa4.44□□□□□ -1.7
SHM1YBR263W YEL077W-AP0CX95 160 aa4.44□□□□□ -1.7
SHM1YBR263W YGR296C-BP0CX96 160 aa4.44□□□□□ -1.7
SHM1YBR263W YPL283W-BP0CX97 160 aa4.44□□□□□ -1.7
SHM1YBR263W YPR204C-AP0CX98 160 aa4.44□□□□□ -1.7
SHM1YBR263W YFL068WP0CX99 160 aa4.44□□□□□ -1.7
SHM1YBR263W YLL066W-AP0CY00 160 aa4.44□□□□□ -1.7
SHM1YBR263W YLL067W-AP0CY01 160 aa4.44□□□□□ -1.7
SHM1YBR263W FRS1P15624 595 aaKnown RBP4.44□□□□□ -1.7
SHM1YBR263W YPS1P32329 569 aa4.44□□□□□ -1.7
SHM1YBR263W YKL102CP34249 101 aa4.44□□□□□ -1.7
SHM1YBR263W UPS2P35200 230 aa4.44□□□□□ -1.7
SHM1YBR263W MRPL38P35996 138 aaPredicted RBP4.44□□□□□ -1.7
SHM1YBR263W PRY2P36110 329 aa4.44□□□□□ -1.7
SHM1YBR263W GCV3P39726 170 aaPredicted RBP4.44□□□□□ -1.7
SHM1YBR263W YGR269WP40326 108 aa4.44□□□□□ -1.7
SHM1YBR263W VPS55P47111 140 aa4.44□□□□□ -1.7
SHM1YBR263W ARL3Q02804 198 aa4.44□□□□□ -1.7
SHM1YBR263W MSC3Q05812 728 aa4.44□□□□□ -1.7
SHM1YBR263W FCF2Q12035 217 aaPredicted RBP4.44□□□□□ -1.7
SHM1YBR263W YOP1Q12402 180 aa4.44□□□□□ -1.7
SHM1YBR263W RPS25AQ3E792 108 aaPredicted RBP4.44□□□□□ -1.7
SHM1YBR263W YDR157WA0A023PZE8 133 aa4.43□□□□□ -1.7
SHM1YBR263W SIP1P32578 815 aa4.43□□□□□ -1.7
SHM1YBR263W QDR3P38227 689 aa4.43□□□□□ -1.7
SHM1YBR263W VMA7P39111 118 aa4.43□□□□□ -1.7
SHM1YBR263W YAR068WP39564 161 aa4.43□□□□□ -1.7
SHM1YBR263W YDL186WP48568 277 aa4.43□□□□□ -1.7
SHM1YBR263W YHP1Q04116 353 aa4.43□□□□□ -1.7
SHM1YBR263W ZEO1Q08245 113 aa4.43□□□□□ -1.7
SHM1YBR263W CSM4Q08955 156 aa4.43□□□□□ -1.7
SHM1YBR263W POM34Q12445 299 aa4.43□□□□□ -1.7
SHM1YBR263W WIP1Q2V2P8 89 aa4.43□□□□□ -1.7
SHM1YBR263W HTB2P02294 131 aa4.43□□□□□ -1.7
SHM1YBR263W RPL27AP0C2H6 136 aaKnown RBP4.43□□□□□ -1.7
SHM1YBR263W RPL27BP0C2H7 136 aaKnown RBP4.43□□□□□ -1.7
SHM1YBR263W UBI4P0CG63 381 aaKnown RBP4.43□□□□□ -1.7
SHM1YBR263W YJR015WP47090 510 aa4.43□□□□□ -1.7
SHM1YBR263W YGR219WP53307 113 aa4.43□□□□□ -1.7
SHM1YBR263W SAE3P89114 91 aa4.43□□□□□ -1.7
SHM1YBR263W HOR7Q05827 59 aa4.43□□□□□ -1.7
SHM1YBR263W POS5Q06892 414 aa4.43□□□□□ -1.7
SHM1YBR263W YPR063CQ12160 140 aa4.43□□□□□ -1.7
SHM1YBR263W YCR022CP25620 114 aa4.42□□□□□ -1.7
SHM1YBR263W FPR2P32472 135 aa4.42□□□□□ -1.7
SHM1YBR263W YKL075CP36083 450 aa4.42□□□□□ -1.7
SHM1YBR263W YBL071CP38185 102 aa4.42□□□□□ -1.7
SHM1YBR263W CSH1P38287 376 aa4.42□□□□□ -1.7
SHM1YBR263W DOG2P38773 246 aa4.42□□□□□ -1.7
SHM1YBR263W DOG1P38774 246 aa4.42□□□□□ -1.7
SHM1YBR263W BDH1P39714 382 aa4.42□□□□□ -1.7
SHM1YBR263W ERG25P53045 309 aa4.42□□□□□ -1.7
SHM1YBR263W YGR017WP53210 297 aa4.42□□□□□ -1.7
SHM1YBR263W YGR018CP53211 109 aa4.42□□□□□ -1.7
SHM1YBR263W YLR179CQ06252 201 aaKnown RBP4.42□□□□□ -1.7
SHM1YBR263W ARR3Q06598 404 aa4.42□□□□□ -1.7
SHM1YBR263W YDL242WQ07746 117 aa4.42□□□□□ -1.7
SHM1YBR263W YGR035W-AQ45U48 73 aa4.42□□□□□ -1.7
SHM1YBR263W PIS1P06197 220 aaKnown RBP4.41□□□□□ -1.7
SHM1YBR263W ELO2P25358 347 aa4.41□□□□□ -1.7
SHM1YBR263W RIB5P38145 238 aa4.41□□□□□ -1.7
SHM1YBR263W YNR066CP53752 436 aa4.41□□□□□ -1.7
SHM1YBR263W BOR1P53838 576 aa4.41□□□□□ -1.7
SHM1YBR263W SWT21P53873 357 aaPredicted RBP4.41□□□□□ -1.7
SHM1YBR263W YMR181CQ03231 154 aa4.41□□□□□ -1.7
SHM1YBR263W FMP16Q12497 93 aa4.41□□□□□ -1.7
SHM1YBR263W YMR316C-AI2HB70 103 aa4.4□□□□□ -1.71
SHM1YBR263W CDC50P25656 391 aa4.4□□□□□ -1.71
SHM1YBR263W AHT1P29589 182 aa4.4□□□□□ -1.71
SHM1YBR263W AVT5P38176 459 aa4.4□□□□□ -1.71
SHM1YBR263W RPA43P46669 326 aa4.4□□□□□ -1.71
SHM1YBR263W TOS8P53147 276 aa4.4□□□□□ -1.71
SHM1YBR263W LST7P53237 242 aa4.4□□□□□ -1.71
SHM1YBR263W CPD1P53314 239 aa4.4□□□□□ -1.71
SHM1YBR263W SPO13P23624 291 aa4.39□□□□□ -1.71
SHM1YBR263W ECM25P32525 599 aa4.39□□□□□ -1.71
SHM1YBR263W YBL059WP34224 193 aa4.39□□□□□ -1.71
SHM1YBR263W RRT1P38192 103 aa4.39□□□□□ -1.71
SHM1YBR263W MIC12P38341 106 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms