RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YMR244WQ04018 355 aa1.76□□□□□ -2.13
NUP170YBL079W ASM4Q05166 528 aa1.76□□□□□ -2.13
NUP170YBL079W YPL225WQ08971 146 aaKnown RBP1.76□□□□□ -2.13
NUP170YBL079W HTZ1Q12692 134 aaKnown RBP1.76□□□□□ -2.13
NUP170YBL079W RPP1AP05318 106 aaPredicted RBP1.75□□□□□ -2.13
NUP170YBL079W MRS1P07266 363 aa1.75□□□□□ -2.13
NUP170YBL079W YJL028WP47062 111 aa1.75□□□□□ -2.13
NUP170YBL079W YGL262WP53054 175 aa1.75□□□□□ -2.13
NUP170YBL079W HST4P53688 370 aa1.75□□□□□ -2.13
NUP170YBL079W TY1A-DR2Q03964 440 aaKnown RBP1.75□□□□□ -2.13
NUP170YBL079W CYC1P00044 109 aaPredicted RBP1.75□□□□□ -2.13
NUP170YBL079W Q0255P03881 472 aa1.75□□□□□ -2.13
NUP170YBL079W SEN2P16658 377 aa1.75□□□□□ -2.13
NUP170YBL079W VAM7P32912 316 aa1.75□□□□□ -2.13
NUP170YBL079W HTD2P38790 280 aaKnown RBP1.75□□□□□ -2.13
NUP170YBL079W CYB5P40312 120 aa1.75□□□□□ -2.13
NUP170YBL079W FIP1P45976 327 aa1.75□□□□□ -2.13
NUP170YBL079W LSM7P53905 115 aaKnown RBP1.75□□□□□ -2.13
NUP170YBL079W VPS28Q02767 242 aa1.75□□□□□ -2.13
NUP170YBL079W DFR1P07807 211 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
NUP170YBL079W FCY2P17064 533 aa1.75□□□□□ -2.13
NUP170YBL079W ERG24P32462 438 aaKnown RBP1.75□□□□□ -2.13
NUP170YBL079W YKL162CP36052 402 aa1.75□□□□□ -2.13
NUP170YBL079W SFT2P38166 215 aa1.75□□□□□ -2.13
NUP170YBL079W AME1P38313 324 aa1.75□□□□□ -2.13
NUP170YBL079W VMA7P39111 118 aa1.75□□□□□ -2.13
NUP170YBL079W SMD3P43321 101 aaKnown RBP1.75□□□□□ -2.13
NUP170YBL079W TPN1P53099 579 aa1.75□□□□□ -2.13
NUP170YBL079W MSO1P53604 210 aaKnown RBP1.75□□□□□ -2.13
NUP170YBL079W YOR105WQ08504 108 aa1.75□□□□□ -2.13
NUP170YBL079W POM33Q12164 279 aa1.75□□□□□ -2.13
NUP170YBL079W GCN1P33892 2672 aaKnown RBP1.74□□□□□ -2.13
NUP170YBL079W YNR066CP53752 436 aa1.74□□□□□ -2.13
NUP170YBL079W YCL001W-AP87012 153 aa1.74□□□□□ -2.13
NUP170YBL079W NAT3Q06504 195 aa1.74□□□□□ -2.13
NUP170YBL079W PBP4Q07362 185 aaKnown RBP1.74□□□□□ -2.13
NUP170YBL079W PIS1P06197 220 aaKnown RBP1.74□□□□□ -2.13
NUP170YBL079W YER039C-AP0CD97 72 aa1.74□□□□□ -2.13
NUP170YBL079W SEC59P20048 519 aa1.74□□□□□ -2.13
NUP170YBL079W ACB1P31787 87 aa1.74□□□□□ -2.13
NUP170YBL079W TIR2P33890 251 aa1.74□□□□□ -2.13
NUP170YBL079W SOH1P38633 127 aa1.74□□□□□ -2.13
NUP170YBL079W PET100P38958 111 aa1.74□□□□□ -2.13
NUP170YBL079W ATC1Q04005 294 aa1.74□□□□□ -2.13
NUP170YBL079W FEX1Q08913 375 aa1.74□□□□□ -2.13
NUP170YBL079W FEX2Q08991 375 aa1.74□□□□□ -2.13
NUP170YBL079W SPO13P23624 291 aa1.74□□□□□ -2.13
NUP170YBL079W YCR016WP25617 290 aaKnown RBP1.74□□□□□ -2.13
NUP170YBL079W MRP49P32388 137 aa1.74□□□□□ -2.13
NUP170YBL079W PPQ1P32945 549 aa1.74□□□□□ -2.13
NUP170YBL079W YBR242WP38331 238 aa1.74□□□□□ -2.13
NUP170YBL079W MST28P39552 234 aa1.74□□□□□ -2.13
NUP170YBL079W ATF1P40353 525 aa1.74□□□□□ -2.13
NUP170YBL079W MOG1P47123 218 aa1.74□□□□□ -2.13
NUP170YBL079W ASI2P53895 289 aa1.74□□□□□ -2.13
NUP170YBL079W HUG1Q6Q5K6 68 aa1.74□□□□□ -2.13
NUP170YBL079W SPS2P08459 502 aa1.74□□□□□ -2.13
NUP170YBL079W HMX1P32339 317 aa1.74□□□□□ -2.13
NUP170YBL079W IPI1P38803 334 aaPredicted RBP1.74□□□□□ -2.13
NUP170YBL079W DID2P69771 204 aa1.74□□□□□ -2.13
NUP170YBL079W AIM45Q12480 344 aaKnown RBP1.74□□□□□ -2.13
NUP170YBL079W RPS22AP0C0W1 130 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W MAG1P22134 296 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W SUR2P38992 349 aa1.73□□□□□ -2.13
NUP170YBL079W YIL077CP40508 320 aa1.73□□□□□ -2.13
NUP170YBL079W RIB4P50861 169 aaPredicted RBP1.73□□□□□ -2.13
NUP170YBL079W YIF1P53845 314 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W MDM10P18409 493 aa1.73□□□□□ -2.13
NUP170YBL079W HAM1P47119 197 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W YPS5P53057 165 aa1.73□□□□□ -2.13
NUP170YBL079W CGR1P53188 120 aa1.73□□□□□ -2.13
NUP170YBL079W DAD1Q12248 94 aa1.73□□□□□ -2.13
NUP170YBL079W RPL42AP0CX27 106 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W RPL42BP0CX28 106 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W RPL24BP24000 155 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W CSH1P38287 376 aa1.73□□□□□ -2.13
NUP170YBL079W ASP1P38986 381 aaPredicted RBP1.73□□□□□ -2.13
NUP170YBL079W YEA4P40004 342 aa1.73□□□□□ -2.13
NUP170YBL079W RRT13P40042 185 aa1.73□□□□□ -2.13
NUP170YBL079W MAK3Q03503 176 aa1.73□□□□□ -2.13
NUP170YBL079W PKR1Q03880 122 aaKnown RBP1.73□□□□□ -2.13
NUP170YBL079W YDR114CQ04597 100 aa1.73□□□□□ -2.13
NUP170YBL079W TIR4Q12218 487 aaPredicted RBP1.73□□□□□ -2.13
NUP170YBL079W CDC7P06243 507 aa1.72□□□□□ -2.13
NUP170YBL079W YER137CP40083 148 aaKnown RBP1.72□□□□□ -2.13
NUP170YBL079W GAT4P40569 121 aa1.72□□□□□ -2.13
NUP170YBL079W RPR2P40571 144 aa1.72□□□□□ -2.13
NUP170YBL079W SER2P42941 309 aa1.72□□□□□ -2.13
NUP170YBL079W TMA23Q03525 211 aa1.72□□□□□ -2.13
NUP170YBL079W KEI1Q06346 221 aa1.72□□□□□ -2.13
NUP170YBL079W POS5Q06892 414 aa1.72□□□□□ -2.13
NUP170YBL079W OSW1Q08692 278 aa1.72□□□□□ -2.13
NUP170YBL079W ATO3Q12359 275 aa1.72□□□□□ -2.13
NUP170YBL079W YLR146W-AQ2V2P1 62 aa1.72□□□□□ -2.13
NUP170YBL079W YLR415CO13578 112 aa1.72□□□□□ -2.13
NUP170YBL079W RPL31BP0C2H9 113 aaKnown RBP1.72□□□□□ -2.13
NUP170YBL079W YCR025CP25352 136 aa1.72□□□□□ -2.13
NUP170YBL079W CDC50P25656 391 aa1.72□□□□□ -2.13
NUP170YBL079W AUA1P32450 94 aa1.72□□□□□ -2.13
NUP170YBL079W HPA3P39979 161 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 78 ms