RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 MPM1P40364 252 aa4□□□□□ -1.77
NME1NME1 MAK31P23059 88 aa3.99□□□□□ -1.77
NME1NME1 UBC6P33296 250 aaPredicted RBP3.99□□□□□ -1.77
NME1NME1 PTC1P35182 281 aa3.99□□□□□ -1.77
NME1NME1 FIG1P38224 298 aa3.99□□□□□ -1.77
NME1NME1 YMR030W-AQ3E760 96 aa3.99□□□□□ -1.77
NME1NME1 YFL065CP43539 102 aa3.98□□□□□ -1.77
NME1NME1 NQM1P53228 333 aaPredicted RBP3.98□□□□□ -1.77
NME1NME1 HRD1Q08109 551 aa3.98□□□□□ -1.77
NME1NME1 SLM6P38343 150 aa3.97□□□□□ -1.77
NME1NME1 YLR046CQ12253 270 aa3.97□□□□□ -1.77
NME1NME1 BUB2P26448 306 aaPredicted RBP3.96□□□□□ -1.78
NME1NME1 YBL010CP32788 280 aa3.96□□□□□ -1.78
NME1NME1 CCS1P40202 249 aaKnown RBP3.96□□□□□ -1.78
NME1NME1 MOB1P40484 314 aa3.96□□□□□ -1.78
NME1NME1 PAC10P48363 199 aa3.96□□□□□ -1.78
NME1NME1 ORM1P53224 222 aa3.96□□□□□ -1.78
NME1NME1 ATP5P09457 212 aa3.95□□□□□ -1.78
NME1NME1 SEN2P16658 377 aa3.95□□□□□ -1.78
NME1NME1 YEL008WP40001 126 aa3.95□□□□□ -1.78
NME1NME1 SBH2P52871 88 aa3.95□□□□□ -1.78
NME1NME1 LIP1Q03579 150 aa3.95□□□□□ -1.78
NME1NME1 YPR202WQ08993 238 aa3.95□□□□□ -1.78
NME1NME1 EFG1Q3E705 233 aaKnown RBP3.95□□□□□ -1.78
NME1NME1 DLS1P40366 167 aa3.94□□□□□ -1.78
NME1NME1 EFM5P53200 248 aaKnown RBP3.94□□□□□ -1.78
NME1NME1 PBI2P0CT04 75 aaKnown RBP3.93□□□□□ -1.78
NME1NME1 RPL30P14120 105 aaKnown RBP3.92□□□□□ -1.78
NME1NME1 YCL042WP25572 119 aa3.92□□□□□ -1.78
NME1NME1 PEX34P25584 144 aa3.92□□□□□ -1.78
NME1NME1 APQ12P40532 138 aa3.92□□□□□ -1.78
NME1NME1 HHT1P61830 136 aa3.92□□□□□ -1.78
NME1NME1 ELP6Q04868 273 aa3.92□□□□□ -1.78
NME1NME1 SRP102P36057 244 aaPredicted RBP3.91□□□□□ -1.78
NME1NME1 YML079WQ03629 201 aa3.91□□□□□ -1.78
NME1NME1 MET31Q03081 177 aa3.89□□□□□ -1.79
NME1NME1 PET20Q99373 253 aa3.89□□□□□ -1.79
NME1NME1 YDR391CQ04170 232 aa3.88□□□□□ -1.79
NME1NME1 UIP4Q08926 304 aa3.88□□□□□ -1.79
NME1NME1 COA3Q3E7B2 85 aa3.88□□□□□ -1.79
NME1NME1 VAR1P02381 398 aa3.87□□□□□ -1.79
NME1NME1 ETR1P38071 380 aa3.87□□□□□ -1.79
NME1NME1 YEL067CP39978 195 aa3.87□□□□□ -1.79
NME1NME1 AQY2P0CD90 149 aa3.86□□□□□ -1.79
NME1NME1 HTD2P38790 280 aaKnown RBP3.86□□□□□ -1.79
NME1NME1 ATG10Q07879 167 aa3.86□□□□□ -1.79
NME1NME1 YGR269WP40326 108 aa3.85□□□□□ -1.79
NME1NME1 CCC1P47818 322 aa3.85□□□□□ -1.79
NME1NME1 YNR064CP53750 290 aa3.85□□□□□ -1.79
NME1NME1 YDL157CQ12082 118 aa3.85□□□□□ -1.79
NME1NME1 YDR102CQ03864 110 aa3.84□□□□□ -1.79
NME1NME1 TAR1Q8TGM6 124 aa3.84□□□□□ -1.79
NME1NME1 SPS2P08459 502 aa3.83□□□□□ -1.8
NME1NME1 YHR212W-AP0CX91 67 aa3.83□□□□□ -1.8
NME1NME1 YGL193CP53097 103 aa3.83□□□□□ -1.8
NME1NME1 FIP1P45976 327 aa3.82□□□□□ -1.8
NME1NME1 YPR114WQ06107 315 aa3.82□□□□□ -1.8
NME1NME1 YPD1Q07688 167 aa3.82□□□□□ -1.8
NME1NME1 UBC8P28263 218 aa3.8□□□□□ -1.8
NME1NME1 YPT31P38555 223 aaKnown RBP3.8□□□□□ -1.8
NME1NME1 DUR1,2P32528 1835 aaKnown RBP3.79□□□□□ -1.8
NME1NME1 INO4P13902 151 aa3.77□□□□□ -1.81
NME1NME1 SPA2P23201 1466 aaKnown RBP3.76□□□□□ -1.81
NME1NME1 YBR242WP38331 238 aa3.76□□□□□ -1.81
NME1NME1 ACC1Q00955 2233 aaKnown RBP3.76□□□□□ -1.81
NME1NME1 YER181CP40097 107 aa3.75□□□□□ -1.81
NME1NME1 RPS25BP0C0T4 108 aaKnown RBP3.74□□□□□ -1.81
NME1NME1 AHT1P29589 182 aa3.74□□□□□ -1.81
NME1NME1 MRPL15P36523 253 aa3.74□□□□□ -1.81
NME1NME1 YDL241WQ07738 123 aa3.74□□□□□ -1.81
NME1NME1 RPS25AQ3E792 108 aaPredicted RBP3.74□□□□□ -1.81
NME1NME1 PET54P10834 293 aa3.72□□□□□ -1.81
NME1NME1 CIN5P40917 295 aa3.71□□□□□ -1.82
NME1NME1 AVO2Q04749 426 aa3.71□□□□□ -1.82
NME1NME1 ADE6P38972 1358 aaKnown RBP3.71□□□□□ -1.82
NME1NME1 PKR1Q03880 122 aaKnown RBP3.7□□□□□ -1.82
NME1NME1 RAV2Q03956 351 aa3.7□□□□□ -1.82
NME1NME1 MOG1P47123 218 aa3.69□□□□□ -1.82
NME1NME1 PHO13P19881 312 aa3.68□□□□□ -1.82
NME1NME1 GEP7P53171 287 aa3.68□□□□□ -1.82
NME1NME1 MRS4P23500 304 aa3.67□□□□□ -1.82
NME1NME1 YJR015WP47090 510 aa3.67□□□□□ -1.82
NME1NME1 YMR007WQ03675 126 aa3.67□□□□□ -1.82
NME1NME1 MRPL24P36525 258 aaPredicted RBP3.66□□□□□ -1.82
NME1NME1 FIT1Q04433 528 aa3.66□□□□□ -1.82
NME1NME1 YPR203WQ08994 102 aa3.66□□□□□ -1.82
NME1NME1 PRE1P22141 198 aaKnown RBP3.65□□□□□ -1.83
NME1NME1 YJL218WP40892 196 aaKnown RBP3.65□□□□□ -1.83
NME1NME1 IPI1P38803 334 aaPredicted RBP3.64□□□□□ -1.83
NME1NME1 RRT7Q07829 113 aa3.64□□□□□ -1.83
NME1NME1 YOR1P53049 1477 aa3.64□□□□□ -1.83
NME1NME1 YGL230CP53074 147 aa3.63□□□□□ -1.83
NME1NME1 SPT14P32363 452 aa3.61□□□□□ -1.83
NME1NME1 SHB17P36136 271 aaKnown RBP3.61□□□□□ -1.83
NME1NME1 FMN1Q03778 218 aa3.61□□□□□ -1.83
NME1NME1 NMA1Q06178 401 aaKnown RBP3.61□□□□□ -1.83
NME1NME1 RFU1Q08003 200 aa3.6□□□□□ -1.83
NME1NME1 YHL037CP38733 133 aa3.59□□□□□ -1.83
NME1NME1 RCF2P53721 224 aa3.59□□□□□ -1.83
NME1NME1 ATP19P81451 68 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms