RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 SIPA1L1O43166 1804 aa4.84□□□□□ -1.63
CASC19-278ENST00000642088 PLIN4Q96Q06 1357 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 TRIM75PA6NK02 468 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 ZNF839A8K0R7 811 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 KDM1AO60341 852 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 CELA3BP08861 270 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 TOB1P50616 345 aaPredicted RBP4.84□□□□□ -1.64
CASC19-278ENST00000642088 MOGSQ13724 837 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 ODF1Q14990 250 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 ZNF174Q15697 407 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 PFKFB3Q16875 520 aaPredicted RBP4.84□□□□□ -1.64
CASC19-278ENST00000642088 ARMCX5Q6P1M9 558 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 OLFM4Q6UX06 510 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 COL23A1Q86Y22 540 aaPredicted RBP4.84□□□□□ -1.64
CASC19-278ENST00000642088 LYSMD2Q8IV50 215 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 TRIM48Q8IWZ4 208 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 TACO1Q9BSH4 297 aaKnown RBP4.84□□□□□ -1.64
CASC19-278ENST00000642088 MRIQ9BWK5 157 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 VPS54Q9P1Q0 977 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 POLLQ9UGP5 575 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 SWAP70Q9UH65 585 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 RNF114Q9Y508 228 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 PCDHB6Q9Y5E3 794 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 PPP2R3BQ9Y5P8 575 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 SCN9AQ15858 1988 aa4.84□□□□□ -1.64
CASC19-278ENST00000642088 ATAD5Q96QE3 1844 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 FLT1P17948 1338 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 A0A1B0GTL3 188 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 TEX51A0A1B0GUA7 166 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 H0YIN7 160 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 N4BP3O15049 544 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 POLR2DO15514 142 aaKnown RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA12O60330 932 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 NEMFO60524 1076 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PLEKHA8P1O95397 391 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PRLP01236 227 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 HLA-DOAP06340 250 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 CYP2D6P10635 497 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 NCAM1P13591 858 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 NLRP5P59047 1200 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 DLX2Q07687 328 aaPredicted RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 NCBP1Q09161 790 aaKnown RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 PKN1Q16512 942 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 EARS2Q5JPH6 523 aaKnown RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 FAM47AQ5JRC9 791 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 FOXP4Q8IVH2 680 aaPredicted RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 PDCL2Q8N4E4 241 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 STPG3Q8N7X2 389 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 DTX3Q8N9I9 347 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 TRIML1Q8N9V2 468 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 CNNM3Q8NE01 707 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 HIPK4Q8NE63 616 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 STAMQ92783 540 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 SLC2A13Q96QE2 648 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 HSD3B7Q9H2F3 369 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA9Q9Y5G4 932 aaKnown RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA8Q9Y5G5 932 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA7Q9Y5G6 932 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA6Q9Y5G7 932 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA3Q9Y5H0 932 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 PCDHGA2Q9Y5H1 932 aa4.83□□□□□ -1.64
CASC19-278ENST00000642088 SRPRBQ9Y5M8 271 aaKnown RBP4.83□□□□□ -1.64
CASC19-278ENST00000642088 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 HRKO00198 91 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 IKBKBO14920 756 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ADAMTS3O15072 1205 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 APOL3O95236 402 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 SERPINC1P01008 464 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 MMP10P09238 476 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 TOP1P11387 765 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 GJA4P35212 333 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 GPR3P46089 330 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 MLLT6P55198 1093 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 PHC1P78364 1004 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 IL13RA1P78552 427 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 SLC6A3Q01959 620 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ORC2Q13416 577 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
CASC19-278ENST00000642088 PTPN14Q15678 1187 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 CT83Q5H943 113 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 KRBA2Q6ZNG9 492 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 B3GNT8Q7Z7M8 397 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 MAPKAPK5Q8IW41 473 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 CCAR2Q8N163 923 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 CCDC112Q8NEF3 446 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZNF526Q8TF50 670 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 LMBR1Q8WVP7 490 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 CPA5Q8WXQ8 436 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 TEKT1Q969V4 418 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 AHCYL2Q96HN2 611 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 SPZ1Q9BXG8 430 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZDHHC5Q9C0B5 715 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 STK32BQ9NY57 414 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZFP69BQ9UJL9 534 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 TUBE1Q9UJT0 475 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 TMPRSS11EQ9UL52 423 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 COL2A1P02458 1487 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 BRCA1P38398 1863 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 SNED1Q8TER0 1413 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms