RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ZXDAP98168 799 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 MYL7Q01449 175 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 TSPY1Q01534 308 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 PPP3CAQ08209 521 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 ZACNQ401N2 412 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 KLHL10Q6JEL2 608 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 INTS8Q75QN2 995 aaKnown RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 DPH6Q7L8W6 267 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 DCP1BQ8IZD4 617 aaKnown RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 RSAD2Q8WXG1 361 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 FGF13Q92913 245 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 TCEAL4Q96EI5 215 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 ZNF512Q96ME7 567 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 SEPT5Q99719 369 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 TSG101Q99816 390 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 ACBD6Q9BR61 282 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 MRPL45Q9BRJ2 306 aaKnown RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 GTPBP4Q9BZE4 634 aaKnown RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 DNAJC25Q9H1X3 360 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 ABI2Q9NYB9 513 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-227ENST00000641811 EPS15L1Q9UBC2 864 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 GTF3C4Q9UKN8 822 aa18.56■□□□□ 0.56
PHGDH-227ENST00000641811 PPP1R3GB7ZBB8 358 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 IKBKBO14920 756 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 CLSTN1O94985 981 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 STAU1O95793 577 aaKnown RBP18.55■□□□□ 0.56
PHGDH-227ENST00000641811 CCNE1P24864 410 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 ATICP31939 592 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 CCR2P41597 374 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 ALDH1A3P47895 512 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 TNNC1P63316 161 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 STIM1Q13586 685 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 ZNF699Q32M78 642 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 MGAT5BQ3V5L5 792 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 INTS6LQ5JSJ4 861 aaKnown RBP18.55■□□□□ 0.56
PHGDH-227ENST00000641811 POTEHQ6S545 545 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 ELMOD1Q8N336 334 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 EDAQ92838 391 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 SYAP1Q96A49 352 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-227ENST00000641811 PKMYT1Q99640 499 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 C1QTNF1Q9BXJ1 281 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 MMRN2Q9H8L6 949 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 KCNK12Q9HB15 430 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.55■□□□□ 0.562e-6■■■■□ 25.6
PHGDH-227ENST00000641811 CDH7Q9ULB5 785 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 MRPS23Q9Y3D9 190 aaKnown RBP18.55■□□□□ 0.56
PHGDH-227ENST00000641811 NME7Q9Y5B8 376 aa18.55■□□□□ 0.56
PHGDH-227ENST00000641811 MYO10Q9HD67 2058 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 MYBPHLA2RUH7 354 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 PSMA7O14818 248 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 HLA-DRAP01903 254 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 MYL4P12829 197 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 CEBPBP17676 345 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 WARSP23381 471 aaKnown RBP18.54■□□□□ 0.56
PHGDH-227ENST00000641811 PCSK1P29120 753 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 EPHB3P54753 998 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 PSMC1P62191 440 aaKnown RBP18.54■□□□□ 0.56
PHGDH-227ENST00000641811 IQCEQ6IPM2 695 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 SCARA5Q6ZMJ2 495 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 NPAS3Q8IXF0 933 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
PHGDH-227ENST00000641811 SPATA18Q8TC71 538 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 MCRS1Q96EZ8 462 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 DHTKD1Q96HY7 919 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-227ENST00000641811 LPIN3Q9BQK8 851 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 SYT15Q9BQS2 421 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 PI4K2AQ9BTU6 479 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 SMYD3Q9H7B4 428 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 LMBRD1Q9NUN5 540 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 KIAA1468Q9P260 1216 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 SORCS3Q9UPU3 1222 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 PCDHB5Q9Y5E4 795 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 DOCK8Q8NF50 2099 aa18.54■□□□□ 0.56
PHGDH-227ENST00000641811 HAPLN1P10915 354 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-227ENST00000641811 EPB41P11171 864 aaKnown RBP18.53■□□□□ 0.56
PHGDH-227ENST00000641811 GJA1P17302 382 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 ATF6P18850 670 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 GNL1P36915 607 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-227ENST00000641811 RAP1GAPP47736 663 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 CDH8P55286 799 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 FKBP3Q00688 224 aaKnown RBP18.53■□□□□ 0.56
PHGDH-227ENST00000641811 LRRC63Q05C16 580 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 SMARCB1Q12824 385 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 PLD1Q13393 1074 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 ZNF667Q5HYK9 610 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 PRSS36Q5K4E3 855 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 SPOPLQ6IQ16 392 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 OR6B3Q8NGW1 331 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 SPPL2BQ8TCT7 592 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 GPR152Q8TDT2 470 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 GIPC2Q8TF65 315 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 C2orf15Q8WU43 125 aaKnown RBP18.53■□□□□ 0.56
PHGDH-227ENST00000641811 NELFBQ8WX92 580 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 DUSP9Q99956 384 aaKnown RBP18.53■□□□□ 0.56
PHGDH-227ENST00000641811 MKNK1Q9BUB5 465 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 LRRC3Q9BY71 257 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 SNX25Q9H3E2 840 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 VRTNQ9H8Y1 702 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 CRTAC1Q9NQ79 661 aa18.53■□□□□ 0.56
PHGDH-227ENST00000641811 AVENQ9NQS1 362 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms