RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 GPR158Q5T848 1215 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 SHC4Q6S5L8 630 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 ITIH5Q86UX2 942 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 ARID3BQ8IVW6 561 aaPredicted RBP15□□□□□ -0.01
LINC00339-211ENST00000641009 CSGALNACT2Q8N6G5 542 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 GIPC2Q8TF65 315 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 CACTINQ8WUQ7 758 aaKnown RBP15□□□□□ -0.01
LINC00339-211ENST00000641009 NELL2Q99435 816 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 TRIM9Q9C026 710 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 PDE11AQ9HCR9 933 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 TMLHEQ9NVH6 421 aa15□□□□□ -0.01
LINC00339-211ENST00000641009 MRPS17Q9Y2R5 130 aaKnown RBP15□□□□□ -0.01
LINC00339-211ENST00000641009 ARNTLO00327 626 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 NCAM2O15394 837 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 YEATS4O95619 227 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
LINC00339-211ENST00000641009 KRT19P08727 400 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 CYP4F8P98187 520 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 VEPH1Q14D04 833 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 LMBRD2Q68DH5 695 aaPredicted RBP14.99□□□□□ -0.01
LINC00339-211ENST00000641009 ZC3H14Q6PJT7 736 aaKnown RBP14.99□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF687Q8N1G0 1237 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 GPD1LQ8N335 351 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 PDCL2Q8N4E4 241 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 CXorf38Q8TB03 319 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 SPPL2BQ8TCT7 592 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 C2orf15Q8WU43 125 aaKnown RBP14.99□□□□□ -0.01
LINC00339-211ENST00000641009 MTMR12Q9C0I1 747 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 TRPV5Q9NQA5 729 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 PIAS3Q9Y6X2 628 aa14.99□□□□□ -0.01
LINC00339-211ENST00000641009 HELZP42694 1942 aaKnown RBP14.98□□□□□ -0.01
LINC00339-211ENST00000641009 PTPRJQ12913 1337 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 MAN2B1O00754 1011 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 CUTAO60888 179 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 FGF19O95750 216 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 HAPLN1P10915 354 aaPredicted RBP14.98□□□□□ -0.01
LINC00339-211ENST00000641009 HOXD13P35453 343 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 MAGEA9P43362 315 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 RPS9P46781 194 aaKnown RBP14.98□□□□□ -0.01
LINC00339-211ENST00000641009 ASIC1P78348 528 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 CSTF1Q05048 431 aaKnown RBP14.98□□□□□ -0.01
LINC00339-211ENST00000641009 BFSP1Q12934 665 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 HSCBQ8IWL3 235 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 YAF2Q8IY57 180 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 DCP1BQ8IZD4 617 aaKnown RBP14.98□□□□□ -0.01
LINC00339-211ENST00000641009 STKLD1Q8NE28 680 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 FAM3CQ92520 227 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 E2F7Q96AV8 911 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 LRRC3BQ96PB8 259 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 LRRC27Q9C0I9 530 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 SEMA4AQ9H3S1 761 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 CUEDC2Q9H467 287 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 IL21Q9HBE4 155 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 DDX43Q9NXZ2 648 aaKnown RBP14.98□□□□□ -0.01
LINC00339-211ENST00000641009 SIX4Q9UIU6 781 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 ITGA11Q9UKX5 1188 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 GPR179Q6PRD1 2367 aa14.98□□□□□ -0.01
LINC00339-211ENST00000641009 HUS1O60921 280 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 PRAMEF12O95522 483 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 TMEM191BP0C7N4 346 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 ZSCAN22P10073 491 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-211ENST00000641009 ACAT1P24752 427 aaKnown RBP14.97□□□□□ -0.01
LINC00339-211ENST00000641009 CASP1P29466 404 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 TSPY1Q01534 308 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 FCHO2Q0JRZ9 810 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 SMARCB1Q12824 385 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 MTAPQ13126 283 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 TAF12Q16514 161 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 ARHGAP15Q53QZ3 475 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 TSSK4Q6SA08 328 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 STXBP4Q6ZWJ1 553 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 CBWD2Q8IUF1 395 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 IQUBQ8NA54 791 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 OR5B17Q8NGF7 314 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 CSGALNACT1Q8TDX6 532 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 PI4K2AQ9BTU6 479 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 FBXO4Q9UKT5 387 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 PCDHB5Q9Y5E4 795 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 SNX9Q9Y5X1 595 aa14.97□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF233A6NK53 670 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 SLC38A8A6NNN8 435 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 DPYSL4O14531 572 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 CHADO15335 359 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 POLR2DO15514 142 aaKnown RBP14.96□□□□□ -0.01
LINC00339-211ENST00000641009 HCRTO43612 131 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 F13A1P00488 732 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 HSP90AA1P07900 732 aaKnown RBP14.96□□□□□ -0.01
LINC00339-211ENST00000641009 CCNE1P24864 410 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 SOX9P48436 509 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 GPR15P49685 360 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 AMPD3Q01432 767 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 PKP1Q13835 747 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 CCDC142Q17RM4 750 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 ZNF528Q3MIS6 628 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 EPM2AIP1Q7L775 607 aaPredicted RBP14.96□□□□□ -0.01
LINC00339-211ENST00000641009 OSTM1Q86WC4 334 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms