RNA–Protein interactions for RNA: ENST00000638605.1

ALK-206, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 1 (best)

Gene ALK, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-206ENST00000638605 FAM49BQ9NUQ9 324 aa13.27□□□□□ -0.28
ALK-206ENST00000638605 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.28
ALK-206ENST00000638605 NME7Q9Y5B8 376 aa13.27□□□□□ -0.28
ALK-206ENST00000638605 TIMM13Q9Y5L4 95 aaPredicted RBP13.27□□□□□ -0.28
ALK-206ENST00000638605 NCANO14594 1321 aa13.27□□□□□ -0.28
ALK-206ENST00000638605 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.27□□□□□ -0.29
ALK-206ENST00000638605 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 F8W810 466 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 M0QYV0 167 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 B4GALT3O60512 393 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 PALMO75781 387 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 DDHD2O94830 711 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 VDRP11473 427 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 RAG1P15918 1043 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 LMO2P25791 158 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 CENPCQ03188 943 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 IFI16Q16666 785 aaKnown RBP13.27□□□□□ -0.29
ALK-206ENST00000638605 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 MMS22LQ6ZRQ5 1243 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 TMEM35BQ8NCS4 154 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 TRIM43Q96BQ3 446 aaPredicted RBP13.27□□□□□ -0.29
ALK-206ENST00000638605 FAM193BQ96PV7 902 aaPredicted RBP13.27□□□□□ -0.29
ALK-206ENST00000638605 ELAC1Q9H777 363 aaKnown RBP13.27□□□□□ -0.29
ALK-206ENST00000638605 TBC1D13Q9NVG8 400 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.29
ALK-206ENST00000638605 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
ALK-206ENST00000638605 INPPL1O15357 1258 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 MICAL2O94851 1124 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 UPP2O95045 317 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 LSM8O95777 96 aaKnown RBP13.26□□□□□ -0.29
ALK-206ENST00000638605 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
ALK-206ENST00000638605 ITGB8P26012 769 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 BRCC3P46736 316 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 OR1G1P47890 313 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 IKBKEQ14164 716 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 PTPROQ16827 1216 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 UNC93AQ86WB7 457 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 UROC1Q96N76 676 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 GOLPH3Q9H4A6 298 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 ADAM22Q9P0K1 906 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 CNOT8Q9UFF9 292 aaKnown RBP13.26□□□□□ -0.29
ALK-206ENST00000638605 TTC3P53804 2025 aa13.26□□□□□ -0.29
ALK-206ENST00000638605 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 O00370 1275 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 KIF4AO95239 1232 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 FTCDO95954 541 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 TIMP1P01033 207 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 ITGB1P05556 798 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 CSF2RAP15509 400 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 WARSP23381 471 aaKnown RBP13.25□□□□□ -0.29
ALK-206ENST00000638605 ACAT1P24752 427 aaKnown RBP13.25□□□□□ -0.29
ALK-206ENST00000638605 DNA2P51530 1060 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 CDR1P51861 262 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
ALK-206ENST00000638605 GOLGA7BQ2TAP0 167 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 TIGD5Q53EQ6 642 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 SMYD5Q6GMV2 418 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 LLGL2Q6P1M3 1020 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
ALK-206ENST00000638605 MON1BQ7L1V2 547 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 RHOT2Q8IXI1 618 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 TPCN2Q8NHX9 752 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 UBA3Q8TBC4 463 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 NUP85Q9BW27 656 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 TSPAN16Q9UKR8 245 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
ALK-206ENST00000638605 COG5Q9UP83 839 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 STXBP5LQ9Y2K9 1186 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 PRG3Q9Y2Y8 225 aaPredicted RBP13.25□□□□□ -0.29
ALK-206ENST00000638605 MICAL3Q7RTP6 2002 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 TBKBP1A7MCY6 615 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 ODC1P11926 461 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 RRM1P23921 792 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 RFC2P35250 354 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 CNGA2Q16280 664 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 PPP1R26Q5T8A7 1209 aaPredicted RBP13.25□□□□□ -0.29
ALK-206ENST00000638605 LIN9Q5TKA1 542 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 DCLRE1AQ6PJP8 1040 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 LIMS2Q7Z4I7 341 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 DAAM2Q86T65 1068 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 NPAS4Q8IUM7 802 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 CASD1Q96PB1 797 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 KIAA1257Q9ULG3 409 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 JRKLQ9Y4A0 524 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 PCDHGC5Q9Y5F6 944 aa13.25□□□□□ -0.29
ALK-206ENST00000638605 LAMA2P24043 3122 aaKnown RBP13.24□□□□□ -0.29
ALK-206ENST00000638605 TMEM110-MUSTN1A8MSY1 372 aa13.24□□□□□ -0.29
ALK-206ENST00000638605 KIAA0355O15063 1070 aa13.24□□□□□ -0.29
ALK-206ENST00000638605 HOXA2O43364 376 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms