RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ARHGAP45Q92619 1136 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 EAF2Q96CJ1 260 aaPredicted RBP4.72□□□□□ -1.65
GABRA1-220ENST00000638159 CATSPER2Q96P56 530 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 PGLYRP2Q96PD5 576 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 NUP58Q9BVL2 599 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 C1QTNF7Q9BXJ2 289 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 HELLSQ9NRZ9 838 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 CDH22Q9UJ99 828 aa4.72□□□□□ -1.65
GABRA1-220ENST00000638159 SETXQ7Z333 2677 aaKnown RBP4.71□□□□□ -1.65
GABRA1-220ENST00000638159 PCNX1Q96RV3 2341 aa4.71□□□□□ -1.65
GABRA1-220ENST00000638159 PRMT3O60678 531 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 KATNA1O75449 491 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 IRF1P10914 325 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 P4HA1P13674 534 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 GRIK1P39086 918 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 TNNT3P45378 269 aaPredicted RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 EFNA5P52803 228 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 OXCT1P55809 520 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 NKX3-2P78367 333 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 HNRNPUQ00839 825 aaKnown RBP eCLIP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SLC27A1Q6PCB7 646 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 USP17L6PQ6QN14 398 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 DPH6Q7L8W6 267 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 RYBPQ8N488 228 aaPredicted RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 RDM1Q8NG50 284 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ITFG1Q8TB96 612 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SSC4DQ8WTU2 575 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 RNF139Q8WU17 664 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 FGF14Q92915 247 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 CLDN23Q96B33 292 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SGF29Q96ES7 293 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 MXRA8Q9BRK3 442 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 DPH1Q9BZG8 443 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 DNAJC17Q9NVM6 304 aaKnown RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 MAFFQ9ULX9 164 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 PPME1Q9Y570 386 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 INSL5Q9Y5Q6 135 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 WDR27A2RRH5 827 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 AGRPO00253 132 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SYN3O14994 580 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 PRPF3O43395 683 aaKnown RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 MT-CO3P00414 261 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ALPPP05187 535 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 LIG4P49917 911 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 TMEM132DQ14C87 1099 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ZNF461Q8TAF7 563 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 NAT6Q93015 286 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 FAM20AQ96MK3 541 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 RIOK1Q9BRS2 568 aaKnown RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 LHX5Q9H2C1 402 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 TDP1Q9NUW8 608 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SUN2Q9UH99 717 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ABCA2Q9BZC7 2435 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ARHGAP10A1A4S6 786 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 HAS3O00219 553 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 DCLK1O15075 740 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ORC4O43929 436 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 USO1O60763 962 aaKnown RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 DDAH2O95865 285 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 CEBPBP17676 345 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 NTSR1P30989 418 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 CSTF2P33240 577 aaKnown RBP eCLIP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 GRIA2P42262 883 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 MYO1EQ12965 1108 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SGCGQ13326 291 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 PHF19Q5T6S3 580 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 CCDC62Q6P9F0 684 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SYT13Q7L8C5 426 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 GDF7Q7Z4P5 450 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ZFRQ96KR1 1074 aaKnown RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 LARP6Q9BRS8 491 aaKnown RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 GZF1Q9H116 711 aaPredicted RBP4.71□□□□□ -1.66
GABRA1-220ENST00000638159 ZSWIM4Q9H7M6 989 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SPHK2Q9NRA0 654 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 SMPD4Q9NXE4 827 aa4.71□□□□□ -1.66
GABRA1-220ENST00000638159 NFASCO94856 1347 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 KDM3AQ9Y4C1 1321 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 CILPO75339 1184 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 C1RP00736 705 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 THEGLP0DJG4 465 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 CASP14P31944 242 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 CIITAP33076 1130 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 TXLNAP40222 546 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 SOX9P48436 509 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 USP11P51784 963 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 CLCN4P51793 760 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 JAG1P78504 1218 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 TLE1Q04724 770 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 DMP1Q13316 513 aaPredicted RBP4.7□□□□□ -1.66
GABRA1-220ENST00000638159 L1TD1Q5T7N2 865 aaKnown RBP4.7□□□□□ -1.66
GABRA1-220ENST00000638159 HAUS3Q68CZ6 603 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 PMS2CLQ68D20 193 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 CCNI2Q6ZMN8 369 aaPredicted RBP4.7□□□□□ -1.66
GABRA1-220ENST00000638159 TMEM74Q96NL1 305 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 OBP2AQ9NY56 170 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 PLEKHB1Q9UF11 243 aaPredicted RBP4.7□□□□□ -1.66
GABRA1-220ENST00000638159 SLC12A6Q9UHW9 1150 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 TBC1D3DA0A087WVF3 549 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 TBC1D3IA0A087WXS9 549 aa4.7□□□□□ -1.66
GABRA1-220ENST00000638159 TBC1D3EA0A087X179 549 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms