RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 FAM3CQ92520 227 aa24.56■■□□□ 1.52
CHRNA7-229ENST00000637552 BORCS6Q96GS4 357 aa24.56■■□□□ 1.52
CHRNA7-229ENST00000637552 HINFPQ9BQA5 517 aa24.56■■□□□ 1.52
CHRNA7-229ENST00000637552 NUP210Q8TEM1 1887 aaPredicted RBP24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 SHISA7A6NL88 538 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 PPP6R2O75170 966 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 CDC25CP30307 473 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 BFSP1Q12934 665 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 LRRTM3Q86VH5 581 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 C1orf127Q8N9H9 656 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 RSPRY1Q96DX4 576 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 CUEDC2Q9H467 287 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 TFIP11Q9UBB9 837 aaKnown RBP24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 ITGA11Q9UKX5 1188 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 R3HCC1Q9Y3T6 440 aaKnown RBP24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 PCDHB5Q9Y5E4 795 aa24.55■■□□□ 1.52
CHRNA7-229ENST00000637552 GPR179Q6PRD1 2367 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 CHADO15335 359 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 HUS1O60921 280 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 KRT19P08727 400 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 TMEM191BP0C7N4 346 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 GPIHBP1Q8IV16 184 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 GPD1LQ8N335 351 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 CSGALNACT2Q8N6G5 542 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 LRRC52Q8N7C0 313 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 GIPC2Q8TF65 315 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 PDE11AQ9HCR9 933 aa24.54■■□□□ 1.52
CHRNA7-229ENST00000637552 KIAA0391O15091 583 aaKnown RBP24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 YEATS4O95619 227 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 HAPLN1P10915 354 aaPredicted RBP24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 CYP4F8P98187 520 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 AMPD3Q01432 767 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 FCHO2Q0JRZ9 810 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 FOXD4L5Q5VV16 416 aaPredicted RBP24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 PDCL2Q8N4E4 241 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 ATRIPQ8WXE1 791 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 FOXD4L4Q8WXT5 416 aaPredicted RBP24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 DHX58Q96C10 678 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 MKNK1Q9BUB5 465 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 MTMR12Q9C0I1 747 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 TASP1Q9H6P5 420 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 PCDHGA2Q9Y5H1 932 aa24.53■■□□□ 1.52
CHRNA7-229ENST00000637552 ARNTLO00327 626 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 CUTAO60888 179 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 HSP90AA1P07900 732 aaKnown RBP24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 CCNE1P24864 410 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 KPNA1P52294 538 aaPredicted RBP24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 ASIC1P78348 528 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 RBP5P82980 135 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 MYL7Q01449 175 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 MTAPQ13126 283 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 FZD5Q13467 585 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 E2F4Q16254 413 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 NFE2Q16621 373 aaPredicted RBP24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 C1orf228Q6PIY5 440 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 HSCBQ8IWL3 235 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 TMEM86AQ8N2M4 240 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 IQUBQ8NA54 791 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 SNX21Q969T3 373 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 MSANTD3Q96H12 275 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 FAM84AQ96KN4 292 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 TRIM9Q9C026 710 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 CHRDQ9H2X0 955 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 KBTBD4Q9NVX7 518 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 DDX43Q9NXZ2 648 aaKnown RBP24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 OBP2AQ9NY56 170 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 L1RE1Q9UN81 338 aa24.52■■□□□ 1.52
CHRNA7-229ENST00000637552 SLC38A8A6NNN8 435 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 ARHGAP29Q52LW3 1261 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 ZNF687Q8N1G0 1237 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 GLIS3Q8NEA6 775 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 RUBCNQ92622 972 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 HPS3Q969F9 1004 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 ANKRD36BP1Q96IX9 119 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 ACBD6Q9BR61 282 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 IER2Q9BTL4 223 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 PI4K2AQ9BTU6 479 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 C8orf33Q9H7E9 229 aaPredicted RBP24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 LMAN1LQ9HAT1 526 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 IL21Q9HBE4 155 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 PRMT8Q9NR22 394 aaPredicted RBP24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 ZSCAN32Q9NX65 697 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 SNX9Q9Y5X1 595 aa24.51■■□□□ 1.51
CHRNA7-229ENST00000637552 ZNF233A6NK53 670 aa24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 PRPF40AO75400 957 aaKnown RBP24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 MLLT6P55198 1093 aaPredicted RBP24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 MYO1EQ12965 1108 aa24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 PPP2R5DQ14738 602 aa24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 LMBRD2Q68DH5 695 aaPredicted RBP24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 TSSK4Q6SA08 328 aa24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 TMLHEQ9NVH6 421 aa24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 ZMYM5Q9UJ78 669 aa24.5■■□□□ 1.51
CHRNA7-229ENST00000637552 EIF3DO15371 548 aaKnown RBP eCLIP24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 PRAMEF12O95522 483 aa24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 TNNC2P02585 160 aa24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 PDIA4P13667 645 aaKnown RBP24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 ACAT1P24752 427 aaKnown RBP24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 WEE1P30291 646 aa24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 PLCB2Q00722 1185 aa24.49■■□□□ 1.51
CHRNA7-229ENST00000637552 SURF1Q15526 300 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms