RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 CDR2LQ86X02 465 aaPredicted RBP16.6■□□□□ 0.25
CLN5-218ENST00000637397 BEST2Q8NFU1 509 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 SCG3Q8WXD2 468 aaKnown RBP16.6■□□□□ 0.25
CLN5-218ENST00000637397 CMTM5Q96DZ9 223 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 TMA16Q96EY4 203 aaKnown RBP16.6■□□□□ 0.25
CLN5-218ENST00000637397 HAUS8Q9BT25 410 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 CHST7Q9NS84 486 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLN5-218ENST00000637397 NINJ2Q9NZG7 142 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 ORC6Q9Y5N6 252 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 DDTLA6NHG4 134 aaPredicted RBP16.6■□□□□ 0.25
CLN5-218ENST00000637397 CHEK2O96017 543 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 EXD1Q8NHP7 514 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 UBA3Q8TBC4 463 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 LPAR1Q92633 364 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 DCLK3Q9C098 648 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 MRPL40Q9NQ50 206 aaKnown RBP16.6■□□□□ 0.25
CLN5-218ENST00000637397 DONSONQ9NYP3 566 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 SNX9Q9Y5X1 595 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 SNX3O60493 162 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 S100BP04271 92 aaPredicted RBP16.6■□□□□ 0.25
CLN5-218ENST00000637397 PTPN4P29074 926 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 SPATA33Q96N06 139 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 TRIM15Q9C019 465 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 ING2Q9H160 280 aa16.6■□□□□ 0.25
CLN5-218ENST00000637397 SHMT1P34896 483 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 GALNT4Q8N4A0 578 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 SLC4A9Q96Q91 983 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 TCN1P20061 433 aaPredicted RBP16.59■□□□□ 0.25
CLN5-218ENST00000637397 CLEC16AQ2KHT3 1053 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 LRRC8EQ6NSJ5 796 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 RSPH3Q86UC2 560 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 TTC39CQ8N584 583 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 KAT5Q92993 513 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 TTC8Q8TAM2 541 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 TMEM39BQ9GZU3 492 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 ZNF70Q9UC06 446 aaPredicted RBP16.59■□□□□ 0.25
CLN5-218ENST00000637397 MAGEA13PA6NCF6 341 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 CBX6O95503 412 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 STIP1P31948 543 aaKnown RBP16.59■□□□□ 0.25
CLN5-218ENST00000637397 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 FAM151AQ8WW52 585 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 IRAK4Q9NWZ3 460 aa16.59■□□□□ 0.25
CLN5-218ENST00000637397 PAPOLAP51003 745 aaKnown RBP16.58■□□□□ 0.25
CLN5-218ENST00000637397 TEDDM1Q5T9Z0 273 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 NOP9Q86U38 636 aaKnown RBP16.58■□□□□ 0.25
CLN5-218ENST00000637397 MCOLN2Q8IZK6 566 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 ACTL9Q8TC94 416 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 PRPF31Q8WWY3 499 aaKnown RBP16.58■□□□□ 0.25
CLN5-218ENST00000637397 EME1Q96AY2 570 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 SH3GL2Q99962 352 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 SIK2Q9H0K1 926 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 SPC25Q9HBM1 224 aa16.58■□□□□ 0.25
CLN5-218ENST00000637397 CPSF3Q9UKF6 684 aaKnown RBP16.58■□□□□ 0.25
CLN5-218ENST00000637397 AGPSO00116 658 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 MUTP22033 750 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 EPHB2P29323 1055 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 AUHQ13825 339 aaKnown RBP16.58■□□□□ 0.24
CLN5-218ENST00000637397 MYBPC2Q14324 1141 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 AGAP11Q8TF27 550 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 TEX13BQ9BXU2 312 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 C17orf75Q9HAS0 396 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 FLT3P36888 993 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 PREPLQ4J6C6 727 aaPredicted RBP16.58■□□□□ 0.24
CLN5-218ENST00000637397 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 IRF2BP2Q7Z5L9 587 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 OR6P1Q8NGX9 317 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 LNX1Q8TBB1 728 aaPredicted RBP16.58■□□□□ 0.24
CLN5-218ENST00000637397 FAM49BQ9NUQ9 324 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 SLC24A2Q9UI40 661 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 SALL4Q9UJQ4 1053 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 GGA2Q9UJY4 613 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 TNS2Q63HR2 1409 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 PPP1R12AO14974 1030 aaPredicted RBP16.58■□□□□ 0.24
CLN5-218ENST00000637397 PYGBP11216 843 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 PRAMEP78395 509 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 CNGA2Q16280 664 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 TMEM120AQ9BXJ8 343 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 AURKCQ9UQB9 309 aa16.58■□□□□ 0.24
CLN5-218ENST00000637397 TISP43B9A030 160 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 DGKIO75912 1065 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 SEC24DO94855 1032 aaPredicted RBP16.57■□□□□ 0.24
CLN5-218ENST00000637397 PECAM1P16284 738 aaPredicted RBP16.57■□□□□ 0.24
CLN5-218ENST00000637397 BGNP21810 368 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 DRD4P21917 467 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 SERPINB3P29508 390 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 MARCKSL1P49006 195 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 KCNJ2P63252 427 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 ORC1Q13415 861 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 GRIK5Q16478 980 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 PKN2Q16513 984 aaKnown RBP16.57■□□□□ 0.24
CLN5-218ENST00000637397 ITPRIPL1Q6GPH6 555 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 SPOCD1Q6ZMY3 1216 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 CENPTQ96BT3 561 aa16.57■□□□□ 0.24
CLN5-218ENST00000637397 FAM193BQ96PV7 902 aaPredicted RBP16.57■□□□□ 0.24
CLN5-218ENST00000637397 KNDC1Q76NI1 1749 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms