RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 PEX3P56589 373 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 GTF2BQ00403 316 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ZBTB16Q05516 673 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 MCL1Q07820 350 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 NFIAQ12857 509 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 KLHL38Q2WGJ6 581 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 LGSNQ5TDP6 509 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PHLDB3Q6NSJ2 640 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CCDC62Q6P9F0 684 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 C4orf19Q8IY42 314 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 RCOR2Q8IZ40 523 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SPICE1Q8N0Z3 855 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 C1orf54Q8WWF1 131 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SPIRE2Q8WWL2 714 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 STRA6Q9BX79 667 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 TRIM6Q9C030 488 aaPredicted RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DCLK3Q9C098 648 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 RANBP17Q9H2T7 1088 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 VCXQ9H320 206 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PKD2L1Q9P0L9 805 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 RAB23Q9ULC3 237 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF148Q9UQR1 794 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 STK38LQ9Y2H1 464 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 IGF2BP3O00425 579 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DNM1LO00429 736 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SLC16A4O15374 487 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PROSCO94903 275 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ZWINTO95229 277 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 TNNI1P19237 187 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 YWHABP31946 246 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PCK1P35558 622 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 GJC1P36383 396 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CD151P48509 253 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 IFI35P80217 286 aaPredicted RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PLCB3Q01970 1234 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 MYO1EQ12965 1108 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 MTMR1Q13613 665 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ACVR2BQ13705 512 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 COG2Q14746 738 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 HADHQ16836 314 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 LONRF1Q17RB8 773 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 UBAP2Q5T6F2 1119 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DCUN1D2Q6PH85 259 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 RNF180Q86T96 592 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 NOP9Q86U38 636 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ARHGEF19Q8IW93 802 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CDAN1Q8IWY9 1227 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SRRM1Q8IYB3 904 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CACTIN-AS1Q8N1I8 211 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CERS5Q8N5B7 392 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 EXD1Q8NHP7 514 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PHOSPHO2Q8TCD6 241 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 KRT35Q92764 455 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 FAM210AQ96ND0 272 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 LRRC37BQ96QE4 947 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 RTKNQ9BST9 563 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PHACTR1Q9C0D0 580 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 TMEM117Q9H0C3 514 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DBNDD1Q9H9R9 158 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 RYDENQ9NUL5 291 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PARVAQ9NVD7 372 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 TAS2R14Q9NYV8 317 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ADAM22Q9P0K1 906 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SLC24A2Q9UI40 661 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PCDHA11Q9Y5I1 949 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ADGRA3Q8IWK6 1321 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 IGSF9BQ9UPX0 1349 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ZNF236Q9UL36 1845 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 COL2A1P02458 1487 aaPredicted RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DENND3A2RUS2 1198 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 LIN7AO14910 233 aaPredicted RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 UBOX5O94941 541 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 KRT1P04264 644 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ASNSP08243 561 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CCND2P30279 289 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PEX5P50542 639 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ARL4CP56559 192 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 KCNA1Q09470 495 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 CRHR2Q13324 411 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SURF1Q15526 300 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 GNPTABQ3T906 1256 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 DCAF12L1Q5VU92 463 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 B3GNT9Q6UX72 402 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 NSMFQ6X4W1 530 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ZDHHC14Q8IZN3 488 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 GDAP1Q8TB36 358 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 STMN2Q93045 179 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ARPC5LQ9BPX5 153 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 TSEN34Q9BSV6 310 aaKnown RBP4.2□□□□□ -1.74
SCN1A-214ENST00000637038 WDR18Q9BV38 432 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 OSBPL8Q9BZF1 889 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 MAF1Q9H063 256 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 ERVK-5Q9HDB9 667 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 SAYSD1Q9NPB0 183 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 TBX20Q9UMR3 447 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 AGTPBP1Q9UPW5 1226 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 USTQ9Y2C2 406 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 C15orf41Q9Y2V0 281 aa4.2□□□□□ -1.74
SCN1A-214ENST00000637038 PCDHB4Q9Y5E5 795 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms