RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 HNRNPH3P31942 346 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 MEA1Q16626 185 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 TDRD12Q587J7 1177 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 LRRTM3Q86VH5 581 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 TOP6BLQ8N6T0 577 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 ZNF397Q8NF99 534 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 DDX1Q92499 740 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 CLP1Q92989 425 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 PANX2Q96RD6 677 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 SYT11Q9BT88 431 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 NKX2-4Q9H2Z4 354 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 SPTLC3Q9NUV7 552 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 BARX2Q9UMQ3 279 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 STXBP5LQ9Y2K9 1186 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 MYBPHLA2RUH7 354 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 ZNF263O14978 683 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 TACC1O75410 805 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 FGF18O76093 207 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 ODC1P11926 461 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 P4HA1P13674 534 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 CD19P15391 556 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 CYP11B1P15538 503 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 LAG3P18627 525 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 RFX1P22670 979 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 DNAJB2P25686 324 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 CTNNB1P35222 781 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 COL4A4P53420 1690 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 KLHL30Q0D2K2 578 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 VARS2Q5ST30 1063 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 OVOS1Q6IE37 1185 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 ENOSF1Q7L5Y1 443 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 RNF168Q8IYW5 571 aaPredicted RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 TMEM176AQ96HP8 235 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 HEXIM2Q96MH2 286 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 DESI2Q9BSY9 194 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 MTIF3Q9H2K0 278 aaKnown RBP11.36□□□□□ -0.59
CLN5-213ENST00000636681 PRO3102Q9H379 93 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 SNX25Q9H3E2 840 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 CYP3A43Q9HB55 503 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 TMEM30AQ9NV96 361 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 GTF3C4Q9UKN8 822 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 PYCARDQ9ULZ3 195 aa11.36□□□□□ -0.59
CLN5-213ENST00000636681 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
CLN5-213ENST00000636681 EPOPA6NHQ4 379 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.59
CLN5-213ENST00000636681 THAP12O43422 761 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 CYP11A1P05108 521 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 FERP16591 822 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 FGFR3P22607 806 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 FECHP22830 423 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 GNA15P30679 374 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 GSDMDP57764 484 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 FMO1Q01740 532 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 CYP27A1Q02318 531 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 TAP1Q03518 808 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 C2CD6Q53TS8 623 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 MDH1BQ5I0G3 518 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 TOGARAM2Q6ZUX3 1019 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
CLN5-213ENST00000636681 BAG1Q99933 345 aaPredicted RBP11.35□□□□□ -0.59
CLN5-213ENST00000636681 NT5C1AQ9BXI3 368 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 NHEJ1Q9H9Q4 299 aaPredicted RBP11.35□□□□□ -0.59
CLN5-213ENST00000636681 MYO6Q9UM54 1294 aa11.35□□□□□ -0.59
CLN5-213ENST00000636681 ZNF638Q14966 1978 aaKnown RBP11.35□□□□□ -0.59
CLN5-213ENST00000636681 SF3B1O75533 1304 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLN5-213ENST00000636681 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 A0A087X0T9 212 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 TMCO5BA8MYB1 307 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 RFXAPO00287 272 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 TULP2O00295 520 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 FAM228BP0C875 321 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 ADORA2BP29275 332 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 PRKCIP41743 596 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 CACNA2D1P54289 1103 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 ARPP19P56211 112 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 ERVFC1P60507 584 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 YWHAHQ04917 246 aaPredicted RBP11.34□□□□□ -0.59
CLN5-213ENST00000636681 GFPT1Q06210 699 aaPredicted RBP11.34□□□□□ -0.59
CLN5-213ENST00000636681 ASTE1Q2TB18 679 aaPredicted RBP11.34□□□□□ -0.59
CLN5-213ENST00000636681 LLGL2Q6P1M3 1020 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 DENND1BQ6P3S1 775 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 PAQR9Q6ZVX9 377 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 TTC9BQ8N6N2 239 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 STKLD1Q8NE28 680 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 ACRBPQ8NEB7 543 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 UBA3Q8TBC4 463 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 ZNF606Q8WXB4 792 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 RIN2Q8WYP3 895 aaPredicted RBP11.34□□□□□ -0.59
CLN5-213ENST00000636681 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
CLN5-213ENST00000636681 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms