RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 TRAPPC12Q8WVT3 735 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 SLCO2A1Q92959 643 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 CFAP57Q96MR6 1250 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 TEPSINQ96N21 525 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 CALN1Q9BXU9 219 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 ZNF302Q9NR11 478 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PGAP2Q9UHJ9 254 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 POLIQ9UNA4 740 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 CHKBQ9Y259 395 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 A0A0G2JND7 137 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 CST8O60676 142 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 MAN1A1P33908 653 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PTP4A2Q12974 167 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 MTFR1Q15390 333 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 FNBP1LQ5T0N5 605 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PLEKHA7Q6IQ23 1121 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 ENOSF1Q7L5Y1 443 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 ZCCHC9Q8N567 271 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 FAM81BQ96LP2 452 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 SYNCQ9H7C4 482 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 UBN1Q9NPG3 1134 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 GINM1Q9NU53 330 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 NKX1-2Q9UD57 310 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 DNALI1O14645 258 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PLSCR1O15162 318 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PMM2O15305 246 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PSTPIP1O43586 416 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 AVILO75366 819 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 TJP3O95049 919 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 GSTA1P08263 222 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 MYBL1P10243 752 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 OTUD4Q01804 1114 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 CDO1Q16878 200 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 GALNTL6Q49A17 601 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 FAXCQ5TGI0 409 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 ABHD15Q6UXT9 468 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 FAM83AQ86UY5 434 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 FAM71DQ8N9W8 422 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 LRRC37BQ96QE4 947 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 CISHQ9NSE2 258 aa14.79□□□□□ -0.04
CACNA1A-228ENST00000636610 PAX7P23759 505 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 PSMA2P25787 234 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 IL1R2P27930 398 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 CTCFP49711 727 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 C3orf62Q6ZUJ4 267 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 PRPF31Q8WWY3 499 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 UTP4Q969X6 686 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 TRIM11Q96F44 468 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 TIPINQ9BVW5 301 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 HACL1Q9UJ83 578 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 CHMP2BQ9UQN3 213 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 MMP8P22894 467 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 EPHB2P29323 1055 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 SNRPFP62306 86 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 TRPC3Q13507 836 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 SETDB1Q15047 1291 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 XKR3Q5GH77 459 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 CIAPIN1Q6FI81 312 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 NPNTQ6UXI9 565 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 PPP1R21Q6ZMI0 780 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 PYROXD1Q8WU10 500 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 RNF19AQ9NV58 838 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 SLC17A7Q9P2U7 560 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 IP6K2Q9UHH9 426 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 ZMYND8Q9ULU4 1186 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 NUMBLQ9Y6R0 609 aa14.78□□□□□ -0.04
CACNA1A-228ENST00000636610 TMEM191CA6NGB0 347 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 ASMTLO95671 621 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 TMEM191BP0C7N4 346 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 MMRN1Q13201 1228 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 ZNF268Q14587 947 aaPredicted RBP14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 SH3PXD2AQ5TCZ1 1133 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 DENND1BQ6P3S1 775 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 KIAA0319LQ8IZA0 1049 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 JDP2Q8WYK2 163 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 PRKAG3Q9UGI9 489 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 SCINQ9Y6U3 715 aa14.77□□□□□ -0.04
CACNA1A-228ENST00000636610 CFAP73A6NFT4 308 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 BACE1P56817 501 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 GPX6P59796 221 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 LACTBP83111 547 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 CAV1Q03135 178 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 CAPSQ13938 189 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 SPARCL1Q14515 664 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 MAPK6Q16659 721 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 MTDHQ86UE4 582 aaKnown RBP14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 TMEM192Q8IY95 271 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 RTKN2Q8IZC4 609 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 WDTC1Q8N5D0 677 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 FBF1Q8TES7 1133 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 GPRASP2Q96D09 838 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 NLRP4Q96MN2 994 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 SLC24A3Q9HC58 644 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF214Q9UL59 606 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 SUFUQ9UMX1 484 aa14.77□□□□□ -0.05
CACNA1A-228ENST00000636610 SUPT20HL2P0C7V6 817 aa14.76□□□□□ -0.05
CACNA1A-228ENST00000636610 HIF1AQ16665 826 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms