RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 MYO5CQ9NQX4 1742 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 RASSF9O75901 435 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 YWHAQP27348 245 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 MAP3K10Q02779 954 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 RESTQ13127 1097 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 CENPPQ6IPU0 288 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 GLIS2Q9BZE0 524 aaPredicted RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 MAP3K4Q9Y6R4 1608 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 VSTM4Q8IW00 320 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 TIPINQ9BVW5 301 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 SMPD4Q9NXE4 827 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 PYCARDQ9ULZ3 195 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 FAM50BQ9Y247 325 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 C2orf81A6NN90 581 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 CYP2C19P33261 490 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 SH3BGRP55822 239 aaPredicted RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 RPRD1BQ9NQG5 326 aaKnown RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 TRIM10Q9UDY6 481 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 PNPLA4P41247 253 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 IFNEQ86WN2 208 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 FAR2Q96K12 515 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 TMEM117Q9H0C3 514 aa16.79■□□□□ 0.28
CLN5-208ENST00000636183 XPO7Q9UIA9 1087 aaKnown RBP16.79■□□□□ 0.28
CLN5-208ENST00000636183 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 MANSC4A6NHS7 340 aaPredicted RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 IL10P22301 178 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 CLCN3P51790 818 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 MTSS1LQ765P7 747 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 LUZP2Q86TE4 346 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 HORMAD1Q86X24 394 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 TMA16Q96EY4 203 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 XPNPEP3Q9NQH7 507 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 UTP6Q9NYH9 597 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 CDC25BP30305 580 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 PTPN7P35236 360 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 OXCT1P55809 520 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 MAP3K7CLP57077 242 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 RPS7P62081 194 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 IL1RL2Q9HB29 575 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 MFAP3LO75121 409 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 RTN2O75298 545 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 ERN1O75460 977 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 PLIN5Q00G26 463 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 POU4F1Q01851 419 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 MIIPQ5JXC2 388 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 TRIM65Q6PJ69 517 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 LNPEPQ9UIQ6 1025 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 H0YC42 278 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 CCDC188H7C350 402 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 RERGLQ9H628 205 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 PAPOLBQ9NRJ5 636 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 GGT7Q9UJ14 662 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 IFRD1O00458 451 aaPredicted RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 GTF2H1P32780 548 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 CCDC142Q17RM4 750 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 ZC2HC1CQ53FD0 456 aaPredicted RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 DHX40Q8IX18 779 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 CCDC33Q8N5R6 958 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 PAWRQ96IZ0 340 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 PGLYRP2Q96PD5 576 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 EPC1Q9H2F5 836 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 RCOR1Q9UKL0 485 aa16.78■□□□□ 0.28
CLN5-208ENST00000636183 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
CLN5-208ENST00000636183 CBX4O00257 560 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 KRT8P05787 483 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 THP07101 528 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 RHOCP08134 193 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 LRRC14Q15048 493 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 FAM118BQ9BPY3 351 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 TRMT6Q9UJA5 497 aaKnown RBP16.77■□□□□ 0.28
CLN5-208ENST00000636183 V9GYQ6 96 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 XYLBO75191 536 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 CNTN1Q12860 1018 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 PANX2Q96RD6 677 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 YY1AP1Q9H869 796 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 AASDHPPTQ9NRN7 309 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 CTNNB1P35222 781 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 MAPRE2Q15555 327 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 P3H1Q32P28 736 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 TRIM69Q86WT6 500 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 CGRRF1Q99675 332 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 DYRK1BQ9Y463 629 aa16.77■□□□□ 0.28
CLN5-208ENST00000636183 LGALS16A8MUM7 142 aa16.77■□□□□ 0.27
CLN5-208ENST00000636183 KRT4P19013 534 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms