RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PLCB1Q9NQ66 1216 aa9.12□□□□□ -0.95
CDKL5-209ENST00000635828 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
CDKL5-209ENST00000635828 C2orf16Q68DN1 1984 aa9.12□□□□□ -0.95
CDKL5-209ENST00000635828 TULP2O00295 520 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 FOXN3O00409 490 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 GABRDO14764 452 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 XPOTO43592 962 aaKnown RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 HUS1O60921 280 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 KCNA4P22459 653 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 GTF2H1P32780 548 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 POLR2FP61218 127 aaKnown RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 ROR1Q01973 937 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 CUL2Q13617 745 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 FAM114A1Q8IWE2 563 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 TFAP2BQ92481 460 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PLVAPQ9BX97 442 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 GANQ9H2C0 597 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 MRPL17Q9NRX2 175 aaKnown RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 STXBP5LQ9Y2K9 1186 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 HCFC2Q9Y5Z7 792 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 ARID5AQ03989 594 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 KLHDC7AQ5VTJ3 777 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 TMEM270Q6UE05 265 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 GBP6Q6ZN66 633 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 SLC22A17Q8WUG5 538 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 KLHL5Q96PQ7 755 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 KCNK16Q96T55 309 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 DNAJC12Q9UKB3 198 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PCDHB8Q9UN66 801 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PTPRDP23468 1912 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 A8MXQ7 604 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PIK3R2O00459 728 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 URODP06132 367 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 ODC1P11926 461 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 UCHL3P15374 230 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 CYP2F1P24903 491 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PPM1AP35813 382 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 GNL1P36915 607 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 USP8P40818 1118 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 ADCY1Q08828 1119 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 MDH1BQ5I0G3 518 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PAQR9Q6ZVX9 377 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 MRPL38Q96DV4 380 aaKnown RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PCMTD1Q96MG8 357 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 ZNF560Q96MR9 790 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 HERC2P3Q9BVR0 1158 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 NIF3L1Q9GZT8 377 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 RNF216Q9NWF9 866 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-209ENST00000635828 APEX2Q9UBZ4 518 aa9.11□□□□□ -0.95
CDKL5-209ENST00000635828 PBX1P40424 430 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 CLCN4P51793 760 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 RAD23BP54727 409 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 TFF2Q03403 129 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 SLC47A2Q86VL8 602 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 JAKMIP2Q96AA8 810 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 PCED1BQ96HM7 432 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 PKMYT1Q99640 499 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 VRTNQ9H8Y1 702 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 R3HCC1Q9Y3T6 440 aaKnown RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 H3BQ06 376 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 CLASP2O75122 1294 aaKnown RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 OAZ2O95190 189 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 RB1P06400 928 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 KLRC2P26717 231 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 DUSP4Q13115 394 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 C2CD6Q53TS8 623 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 POTEHQ6S545 545 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 UBR7Q8N806 425 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 SLC4A11Q8NBS3 891 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 PIK3R5Q8WYR1 880 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 NAA15Q9BXJ9 866 aaKnown RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 ABI2Q9NYB9 513 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 MTRRQ9UBK8 725 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 CYP26A1O43174 497 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 TBX10O75333 385 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 CILPO75339 1184 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 CYP11A1P05108 521 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 CPB1P15086 417 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 SP100P23497 879 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 LTBRP36941 435 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 MTMR3Q13615 1198 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 WDR44Q5JSH3 913 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 PPP1R26Q5T8A7 1209 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 NT5C1BQ96P26 610 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 ZNF518BQ9C0D4 1074 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 HCFC1R1Q9NWW0 138 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 PUF60Q9UHX1 559 aaKnown RBP9.1□□□□□ -0.95
CDKL5-209ENST00000635828 NOTCH4Q99466 2003 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 WDR87Q6ZQQ6 2873 aa9.1□□□□□ -0.95
CDKL5-209ENST00000635828 MTCL1Q9Y4B5 1905 aaKnown RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 PNPLA4P41247 253 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 PGFP49763 221 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 AP3M2P53677 418 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 CYP27A1Q02318 531 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 DRAP1Q14919 205 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 DDR2Q16832 855 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 USP37Q86T82 979 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms