RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 TCEAL8Q8IYN2 117 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 DCP1BQ8IZD4 617 aaKnown RBP16.57■□□□□ 0.24
CLN6-211ENST00000635754 ENOX1Q8TC92 643 aaKnown RBP16.57■□□□□ 0.24
CLN6-211ENST00000635754 ELMO3Q96BJ8 720 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 PGLYRP2Q96PD5 576 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 MRPL45Q9BRJ2 306 aaKnown RBP16.57■□□□□ 0.24
CLN6-211ENST00000635754 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 SNX25Q9H3E2 840 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 SMYD3Q9H7B4 428 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 CYP4F11Q9HBI6 524 aa16.57■□□□□ 0.24
CLN6-211ENST00000635754 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
CLN6-211ENST00000635754 CCDC195A0A1B0GUA6 201 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 GRXCR2A6NFK2 248 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 AFPP02771 609 aaKnown RBP16.56■□□□□ 0.24
CLN6-211ENST00000635754 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLN6-211ENST00000635754 ACAT1P24752 427 aaKnown RBP16.56■□□□□ 0.24
CLN6-211ENST00000635754 HOXA9P31269 272 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 SMARCB1Q12824 385 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 WDR44Q5JSH3 913 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
CLN6-211ENST00000635754 TJAP1Q5JTD0 557 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 IRF2BP1Q8IU81 584 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 OR6B3Q8NGW1 331 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 SEMA4DQ92854 862 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 RIPOR3Q96MK2 946 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 NIF3L1Q9GZT8 377 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
CLN6-211ENST00000635754 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLN6-211ENST00000635754 COQ4Q9Y3A0 265 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 NFE2L3Q9Y4A8 694 aa16.56■□□□□ 0.24
CLN6-211ENST00000635754 MTMR11A4FU01 709 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 PMM2O15305 246 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 P4HA2O15460 535 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 LRG1P02750 347 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 GNL1P36915 607 aaPredicted RBP16.55■□□□□ 0.24
CLN6-211ENST00000635754 MTHFRP42898 656 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 ASPAP45381 313 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
CLN6-211ENST00000635754 RAP1GAPP47736 663 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 SMAD2Q15796 467 aaKnown RBP16.55■□□□□ 0.24
CLN6-211ENST00000635754 NFE2Q16621 373 aaPredicted RBP16.55■□□□□ 0.24
CLN6-211ENST00000635754 CYP26C1Q6V0L0 522 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
CLN6-211ENST00000635754 NECTIN4Q96NY8 510 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 SYT15Q9BQS2 421 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 APOBEC3GQ9HC16 384 aaKnown RBP16.55■□□□□ 0.24
CLN6-211ENST00000635754 CDH9Q9ULB4 789 aa16.55■□□□□ 0.24
CLN6-211ENST00000635754 SYCE3A1L190 88 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 A8MXQ7 604 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 XYLBO75191 536 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 LRRN2O75325 713 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 SEC24AO95486 1093 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 IL9P15248 144 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 LMO2P25791 158 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 CDH8P55286 799 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 MYL5Q02045 173 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 CBX2Q14781 532 aaPredicted RBP16.54■□□□□ 0.24
CLN6-211ENST00000635754 ANO6Q4KMQ2 910 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 ATAT1Q5SQI0 421 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 LRRTM3Q86VH5 581 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 SPPL2BQ8TCT7 592 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 SUSD6Q92537 303 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 SMG7Q92540 1137 aaKnown RBP16.54■□□□□ 0.24
CLN6-211ENST00000635754 FAXDC2Q96IV6 333 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 BCO2Q9BYV7 579 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 RHOBTB2Q9BYZ6 727 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 HSFX1Q9UBD0 423 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 PCDHB5Q9Y5E4 795 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 INSL5Q9Y5Q6 135 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 DENND4AQ7Z401 1863 aa16.54■□□□□ 0.24
CLN6-211ENST00000635754 KCNJ18B7U540 433 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 CCL16O15467 120 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 HCRTO43612 131 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 PAPLNO95428 1278 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 VNN2O95498 520 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 PDGFRBP09619 1106 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 WEE2P0C1S8 567 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 PSMC1P62191 440 aaKnown RBP16.53■□□□□ 0.24
CLN6-211ENST00000635754 DUSP4Q13115 394 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 KCNJ12Q14500 433 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 MAPRE1Q15691 268 aaKnown RBP16.53■□□□□ 0.24
CLN6-211ENST00000635754 MAN2A1Q16706 1144 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 HSP90AA4PQ58FG1 418 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 ZNF707Q96C28 371 aaPredicted RBP16.53■□□□□ 0.24
CLN6-211ENST00000635754 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 SAMSN1Q9NSI8 373 aaKnown RBP16.53■□□□□ 0.24
CLN6-211ENST00000635754 ABI2Q9NYB9 513 aaPredicted RBP16.53■□□□□ 0.24
CLN6-211ENST00000635754 CDH22Q9UJ99 828 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 GTF3C4Q9UKN8 822 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 TCF20Q9UGU0 1960 aaKnown RBP16.53■□□□□ 0.24
CLN6-211ENST00000635754 POU2F2P09086 479 aa16.53■□□□□ 0.24
CLN6-211ENST00000635754 BMP1P13497 986 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms