RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 PIGHQ14442 188 aaPredicted RBP12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 TRIP13Q15645 432 aaPredicted RBP12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 CCL15Q16663 113 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 KYAT1Q16773 422 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 CYP4A22Q5TCH4 519 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 ASB7Q9H672 318 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 KLHL11Q9NVR0 708 aa12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 GEMIN8Q9NWZ8 242 aaKnown RBP12.94□□□□□ -0.34
PHACTR4-206ENST00000632421 SRCAPQ6ZRS2 3230 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 SCN4AP35499 1836 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 F8VP50 259 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 PAEPP09466 180 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 ADCY8P40145 1251 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 GCLCP48506 637 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 GTF2A2P52657 109 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 CAV1Q03135 178 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 MTHFD1LQ6UB35 978 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 ANKS1BQ7Z6G8 1248 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 NLRP7Q8WX94 980 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 PGM2Q96G03 612 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 MS4A4AQ96JQ5 239 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 SLITRK1Q96PX8 696 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 KATNBL1Q9H079 304 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 LHX5Q9H2C1 402 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 SRRM3A6NNA2 597 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 EBAG9O00559 213 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 TP73O15350 636 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 MEFVO15553 781 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 TCF4P15884 667 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 ARF4P18085 180 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 IVDP26440 423 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 RAD23BP54727 409 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 CDH8P55286 799 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 OGDHQ02218 1023 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 ADCY2Q08462 1091 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 ATP13A4Q4VNC1 1196 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 RHBDF2Q6PJF5 856 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 PNMA8AQ86V59 439 aaPredicted RBP12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 NIPA2Q8N8Q9 360 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 FAM118BQ9BPY3 351 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 MORF4L1Q9UBU8 362 aa12.93□□□□□ -0.34
PHACTR4-206ENST00000632421 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 H3BRB1 525 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 ATICP31939 592 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 ITGA8P53708 1063 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 PTPN20Q4JDL3 420 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 UBAP2Q5T6F2 1119 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 MYCBPQ99417 103 aaPredicted RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 TMEM109Q9BVC6 243 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 TRAIPQ9BWF2 469 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 SDCBP2Q9H190 292 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 TUT1Q9H6E5 874 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 SNAI1O95863 264 aaPredicted RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 CDR1P51861 262 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 C6orf118Q5T5N4 469 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 KAZNQ674X7 775 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 DPP9Q86TI2 863 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 CCDC89Q8N998 374 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 UHMK1Q8TAS1 419 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 KAT2BQ92831 832 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 AAASQ9NRG9 546 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 ANAPC5Q9UJX4 755 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 NEU2Q9Y3R4 380 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 GOLGA8SH3BPF8 625 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 RGS16O15492 202 aaPredicted RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 TJP3O95049 919 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 P4HA1P13674 534 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 ATF7P17544 494 aaPredicted RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 VPS41P49754 854 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 CORO7P57737 925 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 COPS2P61201 443 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 TMEM132DQ14C87 1099 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 SLC10A6Q3KNW5 377 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 TMEM130Q8N3G9 435 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 BRI3BPQ8WY22 251 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 CDC42EP4Q9H3Q1 356 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 CNOT10Q9H9A5 744 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 DDX56Q9NY93 547 aaKnown RBP12.92□□□□□ -0.34
PHACTR4-206ENST00000632421 SMIM23A6NLE4 172 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 KRT10P13645 584 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 LMNB2Q03252 620 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 ORC1Q13415 861 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 GRIK4Q16099 956 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 SPOCD1Q6ZMY3 1216 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 GSTA5Q7RTV2 222 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 ANKRD23Q86SG2 305 aa12.91□□□□□ -0.34
PHACTR4-206ENST00000632421 SLC4A11Q8NBS3 891 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms